/var/tmp/portage/sci-biology/ants-9999/work/ |-- ants-9999 | |-- ANTS.cmake | |-- ANTSCopyright.txt | |-- ANTSnightly.sh | |-- ANTsVersionConfig.h.in | |-- CMake | | |-- ANTSExternalData.cmake | | |-- CCache.cmake | | |-- ExternalData_config.cmake.in | | |-- GetGitRevisionDescription.cmake | | |-- ITKSetStandardCompilerFlags.cmake | | |-- ITK_CheckCCompilerFlag.cmake | | |-- ITK_CheckCXXCompilerFlag.cmake | | |-- PreventInBuildInstalls.cmake | | |-- PreventInSourceBuilds.cmake | | |-- ProjectSourceVersion.cmake | | |-- ProjectSourceVersion.cmake.in | | |-- ProjectSourceVersionVars.cmake.in | | |-- SlicerMacroCheckExternalProjectDependency.cmake | | |-- SlicerMacroEmptyExternalProject.cmake | | |-- itkCheckSourceTree.cmake | | `-- pre-commit | |-- CMakeLists.txt | |-- COPYING.txt | |-- CTestConfig.cmake | |-- CTestCustom.cmake | |-- Common.cmake | |-- Examples | | |-- ANTS.cxx | | |-- ANTSConformalMapping.cxx | | |-- ANTSIntegrateVectorField.cxx | | |-- ANTSIntegrateVelocityField.cxx | | |-- ANTSJacobian.cxx | | |-- ANTSUseDeformationFieldToGetAffineTransform.cxx | | |-- ANTSUseLandmarkImagesToGetAffineTransform.cxx | | |-- ANTSUseLandmarkImagesToGetBSplineDisplacementField.cxx | | |-- ANTsVersion.cxx | | |-- ANTsVersion.h | | |-- Atropos.cxx | | |-- AverageAffineTransform.cxx | | |-- AverageAffineTransformNoRigid.cxx | | |-- AverageImages.cxx | | |-- AverageTensorImages.cxx | | |-- CMakeLists.txt | | |-- CheckTopology.cxx | | |-- ClusterImageStatistics.cxx | | |-- ComposeMultiTransform.cxx | | |-- CompositeTransformUtil.cxx | | |-- ComputeSimilarityMetric.cxx | | |-- ConformalMapping.cxx | | |-- ConvertImage.cxx | | |-- ConvertImagePixelType.cxx | | |-- ConvertInputImagePixelTypeToFloat.cxx | | |-- ConvertScalarImageToRGB.cxx | | |-- ConvertToJpg.cxx | | |-- ConvertTransformFile.cxx | | |-- ConvertVectorFieldToVTK.cxx | | |-- CopyImageHeaderInformation.cxx | | |-- CreateDTICohort.cxx | | |-- CreateDisplacementField.cxx | | |-- CreateImage.cxx | | |-- CreateJacobianDeterminantImage.cxx | | |-- CreateTiledMosaic.cxx | | |-- CreateWarpedGridImage.cxx | | |-- CustomColormaps | | | |-- bone.txt | | | |-- christmas.txt | | | |-- christmas2.txt | | | |-- colorcube.txt | | | |-- cool.txt | | | |-- flag.txt | | | |-- itkSnap.txt | | | |-- itkSnap255.txt | | | |-- itkSnap_BRATS.txt | | | |-- lines.txt | | | |-- pink.txt | | | |-- prism.txt | | | `-- vga.txt | | |-- DeNrrd.cxx | | |-- DenoiseImage.cxx | | |-- ExtractRegionFromImage.cxx | | |-- ExtractRegionFromImageByMask.cxx | | |-- ExtractSliceFromImage.cxx | | |-- FitBSplineToPoints.cxx | | |-- GetConnectedComponentsFeatureImages.cxx | | |-- GetMeshAndTopology.cxx | | |-- ImageCompare.cxx | | |-- ImageIntensityStatistics.cxx | | |-- ImageMath.cxx | | |-- ImageMathHelper.cxx | | |-- ImageMathHelper2D.cxx | | |-- ImageMathHelper3D.cxx | | |-- ImageMathHelper4D.cxx | | |-- ImageMath_Templates.hxx | | |-- ImageSetStatistics.cxx | | |-- KellyKapowski.cxx | | |-- KellySlater.cxx | | |-- LabelClustersUniquely.cxx | | |-- LabelGeometryMeasures.cxx | | |-- LabelOverlapMeasures.cxx | | |-- LaplacianThickness.cxx | | |-- LesionFilling.cxx | | |-- MeasureImageSimilarity.cxx | | |-- MeasureMinMaxMean.cxx | | |-- MemoryTest.cxx | | |-- MultiplyImages.cxx | | |-- N3BiasFieldCorrection.cxx | | |-- N4BiasFieldCorrection.cxx | | |-- NonLocalSuperResolution.cxx | | |-- PasteImageIntoImage.cxx | | |-- PermuteFlipImageOrientationAxes.cxx | | |-- PrintHeader.cxx | | |-- RebaseTensorImage.cxx | | |-- ReorientTensorImage.cxx | | |-- ResampleImage.cxx | | |-- ResampleImageBySpacing.cxx | | |-- ResetDirection.cxx | | |-- SetDirectionByMatrix.cxx | | |-- SetOrigin.cxx | | |-- SetSpacing.cxx | | |-- SimulateDisplacementField.cxx | | |-- SmoothDisplacementField.cxx | | |-- SmoothImage.cxx | | |-- StackSlices.cxx | | |-- StudentsTestOnImages.cxx | | |-- SuperResolution.cxx | | |-- SurfaceBasedSmoothing.cxx | | |-- SurfaceCurvature.cxx | | |-- TensorDerivedImage.cxx | | |-- TestSuite | | | |-- ANTS_CC_1_test.cmake | | | |-- ANTS_CC_2_test.cmake | | | |-- ANTS_CC_3_test.cmake | | | |-- ANTS_ELASTIC_test.cmake | | | |-- ANTS_EXP_test.cmake | | | |-- ANTS_GSYN_test.cmake | | | |-- ANTS_MI_1_test.cmake | | | |-- ANTS_MI_2_test.cmake | | | |-- ANTS_MSQ_test.cmake | | | |-- ANTS_PSE_MSQ_IMG_test.cmake | | | |-- ANTS_PSE_MSQ_TXT_test.cmake | | | |-- ANTS_PSE_MSQ_VTK_test.cmake | | | |-- ANTS_ROT_EXP_test.cmake | | | |-- ANTS_ROT_GSYN_test.cmake | | | |-- ANTS_SYN_WITH_TIME_test.cmake | | | |-- ANTS_SYN_test.cmake | | | |-- APOC_OTSU_INIT_test.cmake | | | |-- CMakeLists.txt | | | `-- template_for_executableTestWrapper.cxx.in | | |-- Testing | | | `-- Temporary | | | |-- CTestCostData.txt | | | `-- LastTest.log | | |-- TextureCooccurrenceFeatures.cxx | | |-- TextureRunLengthFeatures.cxx | | |-- ThresholdImage.cxx | | |-- TileImages.cxx | | |-- TimeSCCAN.cxx | | |-- WarpImageMultiTransform.cxx | | |-- WarpTensorImageMultiTransform.cxx | | |-- WarpTimeSeriesImageMultiTransform.cxx | | |-- WarpVTKPolyDataMultiTransform.cxx | | |-- antsAI.cxx | | |-- antsAffineInitializer.cxx | | |-- antsAlignOrigin.cxx | | |-- antsApplyTransforms.cxx | | |-- antsApplyTransformsToPoints.cxx | | |-- antsDisplacementAndVelocityFieldRegistrationCommandIterationUpdate.h | | |-- antsJointFusion.cxx | | |-- antsJointTensorFusion.cxx | | |-- antsLandmarkBasedTransformInitializer.cxx | | |-- antsMotionCorr.cxx | | |-- antsMotionCorrDiffusionDirection.cxx | | |-- antsMotionCorrStats.cxx | | |-- antsRegistration.cxx | | |-- antsRegistration2DDouble.cxx | | |-- antsRegistration2DFloat.cxx | | |-- antsRegistration3DDouble.cxx | | |-- antsRegistration3DFloat.cxx | | |-- antsRegistration4DDouble.cxx | | |-- antsRegistration4DFloat.cxx | | |-- antsRegistrationCommandIterationUpdate.h | | |-- antsRegistrationOptimizerCommandIterationUpdate.h | | |-- antsRegistrationTemplateHeader.cxx | | |-- antsRegistrationTemplateHeader.h | | |-- antsSliceRegularizedRegistration.cxx | | |-- antsSurf.cxx | | |-- antsTransformInfo.cxx | | |-- antsUtilities.cxx | | |-- antsUtilities.h | | |-- antsUtilitiesTesting.cxx | | |-- antsVol.cxx | | |-- compareTwoTransforms.cxx | | |-- iMath.cxx | | |-- iMathFunctions.h | | |-- iMathFunctions.hxx | | |-- iMathFunctions1.h | | |-- iMathFunctions1.hxx | | |-- iMathFunctions2.h | | |-- iMathFunctions2.hxx | | |-- include | | | |-- ANTSConformalMapping.h | | | |-- ANTSIntegrateVectorField.h | | | |-- ANTSIntegrateVelocityField.h | | | |-- ANTSJacobian.h | | | |-- ANTSUseDeformationFieldToGetAffineTransform.h | | | |-- ANTSUseLandmarkImagesToGetAffineTransform.h | | | |-- ANTSUseLandmarkImagesToGetBSplineDisplacementField.h | | | |-- ANTS_.h | | | |-- Atropos.h | | | |-- AverageAffineTransform.h | | | |-- AverageAffineTransformNoRigid.h | | | |-- AverageImages.h | | | |-- AverageTensorImages.h | | | |-- CheckTopology.h | | | |-- ClusterImageStatistics.h | | | |-- ComposeMultiTransform.h | | | |-- CompositeTransformUtil.h | | | |-- ComputeSimilarityMetric.h | | | |-- ConformalMapping.h | | | |-- ConvertImage.h | | | |-- ConvertImagePixelType.h | | | |-- ConvertInputImagePixelTypeToFloat.h | | | |-- ConvertScalarImageToRGB.h | | | |-- ConvertToJpg.h | | | |-- ConvertTransformFile.h | | | |-- ConvertVectorFieldToVTK.h | | | |-- CopyImageHeaderInformation.h | | | |-- CreateDTICohort.h | | | |-- CreateDisplacementField.h | | | |-- CreateImage.h | | | |-- CreateJacobianDeterminantImage.h | | | |-- CreateTiledMosaic.h | | | |-- CreateWarpedGridImage.h | | | |-- DeNrrd.h | | | |-- DenoiseImage.h | | | |-- ExtractRegionFromImage.h | | | |-- ExtractRegionFromImageByMask.h | | | |-- ExtractSliceFromImage.h | | | |-- FitBSplineToPoints.h | | | |-- GetConnectedComponentsFeatureImages.h | | | |-- GetMeshAndTopology.h | | | |-- ImageCompare.h | | | |-- ImageIntensityStatistics.h | | | |-- ImageMath.h | | | |-- ImageSetStatistics.h | | | |-- KellyKapowski.h | | | |-- KellySlater.h | | | |-- LabelClustersUniquely.h | | | |-- LabelGeometryMeasures.h | | | |-- LabelOverlapMeasures.h | | | |-- LaplacianThickness.h | | | |-- LesionFilling.h | | | |-- MeasureImageSimilarity.h | | | |-- MeasureMinMaxMean.h | | | |-- MemoryTest.h | | | |-- MultiplyImages.h | | | |-- N3BiasFieldCorrection.h | | | |-- N4BiasFieldCorrection.h | | | |-- NonLocalSuperResolution.h | | | |-- PasteImageIntoImage.h | | | |-- PermuteFlipImageOrientationAxes.h | | | |-- PrintHeader.h | | | |-- RebaseTensorImage.h | | | |-- ReorientTensorImage.h | | | |-- ResampleImage.h | | | |-- ResampleImageBySpacing.h | | | |-- ResetDirection.h | | | |-- SetDirectionByMatrix.h | | | |-- SetOrigin.h | | | |-- SetSpacing.h | | | |-- SimulateDisplacementField.h | | | |-- SmoothDisplacementField.h | | | |-- SmoothImage.h | | | |-- StackSlices.h | | | |-- StudentsTestOnImages.h | | | |-- SuperResolution.h | | | |-- SurfaceBasedSmoothing.h | | | |-- SurfaceCurvature.h | | | |-- TensorDerivedImage.h | | | |-- TextureCooccurrenceFeatures.h | | | |-- TextureRunLengthFeatures.h | | | |-- ThresholdImage.h | | | |-- TileImages.h | | | |-- TimeSCCAN.h | | | |-- WarpImageMultiTransform.h | | | |-- WarpTensorImageMultiTransform.h | | | |-- WarpTimeSeriesImageMultiTransform.h | | | |-- WarpVTKPolyDataMultiTransform.h | | | |-- ants.h | | | |-- antsAI.h | | | |-- antsAffineInitializer.h | | | |-- antsAlignOrigin.h | | | |-- antsApplyTransforms.h | | | |-- antsApplyTransformsToPoints.h | | | |-- antsImageRead.h | | | |-- antsImageWrite.h | | | |-- antsJointFusion.h | | | |-- antsJointTensorFusion.h | | | |-- antsLandmarkBasedTransformInitializer.h | | | |-- antsMotionCorr.h | | | |-- antsMotionCorrDiffusionDirection.h | | | |-- antsMotionCorrStats.h | | | |-- antsRegistration.h | | | |-- antsSliceRegularizedRegistration.h | | | |-- antsSurf.h | | | |-- antsTransformInfo.h | | | |-- antsUtilitiesTesting.h | | | |-- antsVol.h | | | |-- ants_moco.h | | | |-- compareTwoTransforms.h | | | |-- iMath.h | | | |-- itkCommandLineParserTest.h | | | |-- sccan.h | | | `-- simpleSynRegistration.h | | |-- itkCommandLineParserTest.cxx | | |-- itkTestMain.h | | |-- itkantsRegistrationHelper.h | | |-- itkantsRegistrationHelper.hxx | | |-- make_interpolator_snip.tmpl | | |-- sccan.cxx | | |-- simpleSynRegistration.cxx | | `-- template_for_executables.cxx.in | |-- ImageRegistration | | |-- ANTS_affine_registration.h | | |-- ANTS_affine_registration2.h | | |-- itkANTSAffine3DTransform.h | | |-- itkANTSAffine3DTransform.hxx | | |-- itkANTSCenteredAffine2DTransform.h | | |-- itkANTSCenteredAffine2DTransform.hxx | | |-- itkANTSImageRegistrationOptimizer.cxx | | |-- itkANTSImageRegistrationOptimizer.h | | |-- itkANTSImageTransformation.cxx | | |-- itkANTSImageTransformation.h | | |-- itkANTSLabeledPointSet.h | | |-- itkANTSSimilarityMetric.h | | |-- itkAvantsMutualInformationRegistrationFunction.cxx | | |-- itkAvantsMutualInformationRegistrationFunction.h | | |-- itkAvantsPDEDeformableRegistrationFunction.h | | |-- itkCrossCorrelationRegistrationFunction.cxx | | |-- itkCrossCorrelationRegistrationFunction.h | | |-- itkExpectationBasedPointSetRegistrationFunction.h | | |-- itkExpectationBasedPointSetRegistrationFunction.hxx | | |-- itkJensenHavrdaCharvatTsallisLabeledPointSetMetric.h | | |-- itkJensenHavrdaCharvatTsallisLabeledPointSetMetric.hxx | | |-- itkJensenHavrdaCharvatTsallisPointSetMetric.h | | |-- itkJensenHavrdaCharvatTsallisPointSetMetric.hxx | | |-- itkJensenTsallisBSplineRegistrationFunction.h | | |-- itkJensenTsallisBSplineRegistrationFunction.hxx | | |-- itkPICSLAdvancedNormalizationToolKit.h | | |-- itkPICSLAdvancedNormalizationToolKit.hxx | | |-- itkProbabilisticRegistrationFunction.cxx | | |-- itkProbabilisticRegistrationFunction.h | | |-- itkSpatialMutualInformationRegistrationFunction.cxx | | |-- itkSpatialMutualInformationRegistrationFunction.h | | |-- itkSyNDemonsRegistrationFunction.cxx | | |-- itkSyNDemonsRegistrationFunction.h | | |-- itkVectorParameterizedNeighborhoodOperatorImageFilter.h | | `-- itkVectorParameterizedNeighborhoodOperatorImageFilter.hxx | |-- ImageSegmentation | | |-- antsAtroposSegmentationImageFilter.h | | |-- antsAtroposSegmentationImageFilter.hxx | | |-- antsBoxPlotQuantileListSampleFilter.h | | |-- antsBoxPlotQuantileListSampleFilter.hxx | | |-- antsGaussianListSampleFunction.h | | |-- antsGaussianListSampleFunction.hxx | | |-- antsGrubbsRosnerListSampleFilter.h | | |-- antsGrubbsRosnerListSampleFilter.hxx | | |-- antsHistogramParzenWindowsListSampleFunction.h | | |-- antsHistogramParzenWindowsListSampleFunction.hxx | | |-- antsJointHistogramParzenShapeAndOrientationListSampleFunction.h | | |-- antsJointHistogramParzenShapeAndOrientationListSampleFunction.hxx | | |-- antsJointHistogramParzenWindowsListSampleFunction.h | | |-- antsJointHistogramParzenWindowsListSampleFunction.hxx | | |-- antsListSampleFunction.h | | |-- antsListSampleFunction.hxx | | |-- antsListSampleToListSampleFilter.h | | |-- antsListSampleToListSampleFilter.hxx | | |-- antsLogEuclideanGaussianListSampleFunction.h | | |-- antsLogEuclideanGaussianListSampleFunction.hxx | | |-- antsManifoldParzenWindowsListSampleFunction.h | | |-- antsManifoldParzenWindowsListSampleFunction.hxx | | |-- antsPartialVolumeGaussianListSampleFunction.h | | |-- antsPartialVolumeGaussianListSampleFunction.hxx | | |-- antsPassThroughListSampleFilter.h | | |-- antsPassThroughListSampleFilter.hxx | | |-- itkWeightedVotingFusionImageFilter.h | | `-- itkWeightedVotingFusionImageFilter.hxx | |-- README.md | |-- README.txt | |-- Scripts | | |-- ANTSAverage2DAffine.sh | | |-- ANTSAverage3DAffine.sh | | |-- ANTSpexec.sh | | |-- ants.sh | | |-- antsASLProcessing.R | | |-- antsASLProcessing.sh | | |-- antsAtroposN4.sh | | |-- antsBOLDNetworkAnalysis.R | | |-- antsBrainExtraction.sh | | |-- antsCookTemplatePriors.sh | | |-- antsCorticalThickness.sh | | |-- antsIntermodalityIntrasubject.sh | | |-- antsIntroduction.sh | | |-- antsJointLabelFusion.sh | | |-- antsJointLabelFusion2.sh | | |-- antsLaplacianBoundaryCondition.R | | |-- antsLongitudinalCorticalThickness.sh | | |-- antsLongitudinalJointLabelFusion.sh | | |-- antsMotionCorrExample | | |-- antsMultivariateTemplateConstruction.sh | | |-- antsMultivariateTemplateConstruction2.sh | | |-- antsNetworkAnalysis.R | | |-- antsNeuroimagingBattery | | |-- antsRegistrationSpaceTime.sh | | |-- antsRegistrationSyN.sh | | |-- antsRegistrationSyNQuick.sh | | |-- antsaffine.sh | | |-- antsbashstats.sh | | |-- antsdeformationmag.sh | | |-- antsqsub.sh | | |-- antswithdt.sh | | |-- asymmetry.sh | | |-- basic_ants_example.sh | | |-- buildtemplateparallel.sh | | |-- cbf_pasl_robust_batch.R | | |-- cbf_pcasl_robust_batch.R | | |-- directlabels.sh | | |-- geodesicinterpolation.sh | | |-- guidedregistration.sh | | |-- landmarkmatch.sh | | |-- lohmann.sh | | |-- multi_template_script.sh | | |-- newAntsExample.sh | | |-- optimalsmooth.sh | | |-- phantomstudy.sh | | |-- registerimages.pl | | |-- runprogramonimageset.pl | | |-- sccan_tests | | |-- shapeupdatetotemplate.sh | | |-- skel.sh | | |-- sliceBySliceOperation.sh | | |-- submitexperimentalbuild.sh | | |-- sygnccavg.sh | | |-- thickstudy.sh | | |-- unbiased_longitudinal_map | | |-- unbiased_pairwise_registration.sh | | |-- unbiased_pairwise_registration_with_aux_images.sh | | |-- waitForPBSQJobs.pl | | |-- waitForSGEQJobs.pl | | |-- waitForSlurmJobs.pl | | |-- waitForXGridJobs.pl | | |-- warpimages.pl | | |-- weightedaverage.pl | | `-- weightedaverage.sh | |-- SuperBuild | | |-- External_Cppcheck.cmake | | |-- External_ITKv5.cmake | | |-- External_KWStyle.cmake | | |-- External_SlicerExecutionModel.cmake | | |-- External_Uncrustify.cmake | | |-- External_VTK.cmake | | |-- External_VTK_build_step.cmake.in | | `-- External_VTK_patch.cmake | |-- SuperBuild.cmake | |-- Temporary | | |-- antsFastMarchingImageFilter.h | | |-- antsFastMarchingImageFilter.hxx | | |-- deprecate_itkFEMElement3DC0LinearTriangular.cxx | | |-- deprecate_itkFEMElement3DC0LinearTriangular.h | | |-- deprecate_itkFEMElement3DC0LinearTriangularLaplaceBeltrami.cxx | | |-- deprecate_itkFEMElement3DC0LinearTriangularLaplaceBeltrami.h | | |-- deprecate_itkFEMElement3DC0LinearTriangularMembrane.cxx | | |-- deprecate_itkFEMElement3DC0LinearTriangularMembrane.h | | |-- itkAddConstantToImageFilter.h | | |-- itkDijkstrasAlgorithm.cxx | | |-- itkDijkstrasAlgorithm.h | | |-- itkDivideByConstantImageFilter.h | | |-- itkFEMConformalMap.cxx | | |-- itkFEMConformalMap.h | | |-- itkFEMDiscConformalMap.cxx | | |-- itkFEMDiscConformalMap.h | | |-- itkFEMElement3DMembrane1DOF.h | | |-- itkFEMElement3DMembrane1DOF.hxx | | |-- itkManifoldIntegrationAlgorithm.cxx | | |-- itkManifoldIntegrationAlgorithm.h | | |-- itkMeanSquaresPointSetToPointSetIntensityMetricv4.h | | |-- itkMeanSquaresPointSetToPointSetIntensityMetricv4.hxx | | |-- itkMultiplyByConstantImageFilter.h | | `-- topological_numbers.h | |-- Tensor | | |-- TensorFunctions.h | | |-- itkDecomposeTensorFunction2.h | | |-- itkDecomposeTensorFunction2.hxx | | |-- itkExpTensorImageFilter.h | | |-- itkExpTensorImageFilter.hxx | | |-- itkLogTensorImageFilter.h | | |-- itkLogTensorImageFilter.hxx | | |-- itkPreservationOfPrincipalDirectionTensorReorientationImageFilter.cxx | | |-- itkPreservationOfPrincipalDirectionTensorReorientationImageFilter.h | | |-- itkRotationMatrixFromVectors.h | | |-- itkWarpTensorImageMultiTransformFilter.h | | `-- itkWarpTensorImageMultiTransformFilter.hxx | |-- TestData | | |-- ANON0006_20_T1_dbg_splayed.nii.gz.md5 | | |-- ANON0006_20_T1_sag_twisted.nii.gz.md5 | | |-- CompositeTransformUtilTest.result.h5.md5 | | |-- CompositeTransformUtilTest_AffineTransform.mat.md5 | | |-- CompositeTransformUtilTest_RigidTransform.mat.md5 | | |-- CompositeTransformUtilTest_SyNTransform.nii.gz.md5 | | |-- Data | | | |-- B1.tiff.md5 | | | |-- B2.tiff.md5 | | | |-- B3.tiff.md5 | | | |-- B4.tiff.md5 | | | |-- B5.tiff.md5 | | | |-- Frown.nii.md5 | | | |-- Frown.txt.md5 | | | |-- Frown.vtk.md5 | | | |-- README.md5 | | | |-- Smile.nii.md5 | | | |-- Smile.txt.md5 | | | |-- Smile.vtk.md5 | | | |-- beetlerot.jpg.md5 | | | |-- c.nii.gz.md5 | | | |-- ch2brainmask.nii.gz.md5 | | | |-- chalf.nii.gz.md5 | | | |-- ford.jpg.md5 | | | |-- functional.nii.md5 | | | |-- listPriorWolk_nirepDemo.txt.md5 | | | |-- mov2.nii.gz.md5 | | | |-- myview1.csv.md5 | | | |-- myview2.csv.md5 | | | |-- myview3.csv.md5 | | | |-- myview4.csv.md5 | | | |-- myview_mismatch.csv.md5 | | | |-- phantomAwmgm.jpg.md5 | | | |-- phantomBwmgm.jpg.md5 | | | |-- phantomCwmgm.jpg.md5 | | | |-- phantomDwmgm.jpg.md5 | | | |-- phantomEwmgm.jpg.md5 | | | |-- phantomFwmgm.jpg.md5 | | | |-- phantomGwmgm.jpg.md5 | | | |-- phantomHwmgm.jpg.md5 | | | |-- phantomtemplate.jpg.md5 | | | |-- priorScaleListWolk_nirep0p1Demo.csv.md5 | | | |-- r16mask.nii.gz.md5 | | | |-- r16priors.nii.gz.md5 | | | |-- r16roth.nii.gz.md5 | | | |-- r16slice.nii.gz.md5 | | | |-- r27slice.nii.gz.md5 | | | |-- r30slice.nii.gz.md5 | | | |-- r62slice.nii.gz.md5 | | | |-- r64roth.nii.gz.md5 | | | |-- r64slice.nii.gz.md5 | | | |-- r85slice.nii.gz.md5 | | | |-- ref2.nii.gz.md5 | | | |-- test_DiReCT.sh.md5 | | | |-- test_image_ground_truth.nii.gz.md5 | | | |-- test_image_seg.nii.gz.md5 | | | |-- wolk_dataMCINormalDemo.mhd.md5 | | | |-- wolk_dataMCINormalDemo.raw.md5 | | | `-- wolk_mask.nii.gz.md5 | | |-- Initializer_0.05_antsRegistrationTest_AffineRotationMasks.mat.md5 | | |-- Initializer_0.05_antsRegistrationTest_AffineRotationNoMasks.mat.md5 | | |-- Initializer_0.05_antsRegistrationTest_AffineScaleMasks.mat.md5 | | |-- Initializer_0.05_antsRegistrationTest_AffineScaleMasks_Float.mat.md5 | | |-- Initializer_0.05_antsRegistrationTest_RigidRotationHeadMasks.mat.md5 | | |-- Initializer_0.05_antsRegistrationTest_RigidRotationNoMasks.mat.md5 | | |-- Initializer_0.05_antsRegistrationTest_RigidRotationNoMasks_Float.mat.md5 | | |-- Initializer_0.05_antsRegistrationTest_SimilarityRotationNoMasks.mat.md5 | | |-- Initializer_0.05_antsRegistrationTest_SimilarityScaleNoMasks.mat.md5 | | |-- Initializer_antsRegistrationTest_AffineTranslationMasks.mat.md5 | | |-- Initializer_antsRegistrationTest_RigidAnisotropicMasks.mat.md5 | | |-- Initializer_antsRegistrationTest_RigidRotGeomNoMasks.mat.md5 | | |-- Initializer_antsRegistrationTest_ScaleRotationRescaleHeadMasks.mat.md5 | | |-- Initializer_antsRegistrationTest_ScaleRotationRescaleHeadMasks_Float.mat.md5 | | |-- Initializer_antsRegistrationTest_TranslationRescaleHeadMasks.mat.md5 | | |-- Initializer_antsRegistrationTest_TranslationRescaleHeadMasks_Float.mat.md5 | | |-- antsApplyTransformsTesting.result.nii.gz.md5 | | |-- antsApplyTransformsTesting_InputWarpTransform.nii.gz.md5 | | |-- antsRegistrationTest_AffineRotationMasks.result.nii.gz.md5 | | |-- antsRegistrationTest_AffineRotationNoMasks.result.nii.gz.md5 | | |-- antsRegistrationTest_AffineScaleMasks.result.nii.gz.md5 | | |-- antsRegistrationTest_AffineScaleNoMasks.result.nii.gz.md5 | | |-- antsRegistrationTest_AffineTranslationMasks.result.nii.gz.md5 | | |-- antsRegistrationTest_AffineTranslationNoMasks.result.nii.gz.md5 | | |-- antsRegistrationTest_CCSimilarityRotationMasks.result.nii.gz.md5 | | |-- antsRegistrationTest_MSEAffineRotationMasks.result.nii.gz.md5 | | |-- antsRegistrationTest_MSESimilarityRotationMasks.result.nii.gz.md5 | | |-- antsRegistrationTest_MSESimilarityRotationMasks_Float.result.nii.gz.md5 | | |-- antsRegistrationTest_RigidAnisotropicMasks.result.nii.gz.md5 | | |-- antsRegistrationTest_RigidRotGeomNoMasks.result.nii.gz.md5 | | |-- antsRegistrationTest_RigidRotaRotaRotNoMasks.result.nii.gz.md5 | | |-- antsRegistrationTest_RigidRotaRotaRotNoMasks_Float.result.nii.gz.md5 | | |-- antsRegistrationTest_RigidRotationHeadMasks.result.nii.gz.md5 | | |-- antsRegistrationTest_RigidRotationMasks.result.nii.gz.md5 | | |-- antsRegistrationTest_RigidRotationNoMasks.result.nii.gz.md5 | | |-- antsRegistrationTest_ScaleRotationRescaleHeadMasks.result.nii.gz.md5 | | |-- antsRegistrationTest_ScaleRotationRescaleHeadMasks_Float.result.nii.gz.md5 | | |-- antsRegistrationTest_ScaleTranslationRescaleHeadMasks.result.nii.gz.md5 | | |-- antsRegistrationTest_SimilarityRotationMasks.result.nii.gz.md5 | | |-- antsRegistrationTest_SimilarityRotationNoMasks.result.nii.gz.md5 | | |-- antsRegistrationTest_SimilarityScaleMasks.result.nii.gz.md5 | | |-- antsRegistrationTest_SimilarityScaleNoMasks.result.nii.gz.md5 | | |-- antsRegistrationTest_SimilarityTranslationRescaleNoMasks.result.nii.gz.md5 | | |-- antsRegistrationTest_SimilarityTranslationRescaleNoMasks_Float.result.nii.gz.md5 | | |-- antsRegistrationTest_SyNScaleNoMasks.result.nii.gz.md5 | | |-- antsRegistrationTest_SyNScaleNoMasks_Float.result.nii.gz.md5 | | |-- antsRegistrationTest_initialize_transforms_per_stageComposite.result.h5.md5 | | |-- rotation.geom.test.nii.gz.md5 | | |-- rotation.rescale.test.nii.gz.md5 | | |-- rotation.test.nii.gz.md5 | | |-- rotation.test_mask.nii.gz.md5 | | |-- scale.test.nii.gz.md5 | | |-- scale.test_mask.nii.gz.md5 | | |-- test.nii.gz.md5 | | |-- test_mask.nii.gz.md5 | | |-- translation.rescale.test.nii.gz.md5 | | |-- translation.test.nii.gz.md5 | | `-- translation.test_mask.nii.gz.md5 | |-- Utilities | | |-- ANTSMakeMD5SigFileAndMoveData.py | | |-- BinaryImageToMeshFilter.h | | |-- DevelopmentSetupScripts | | | `-- SetupHooks.sh | | |-- Hooks | | | |-- commit-msg | | | |-- pre-commit | | | |-- pre-commit-style | | | `-- prepare-commit-msg | | |-- ReadWriteData.cxx | | |-- ReadWriteData.h | | |-- SetupForDevelopment.sh | | |-- antsAllocImage.h | | |-- antsCommandLineOption.cxx | | |-- antsCommandLineOption.h | | |-- antsCommandLineParser.cxx | | |-- antsCommandLineParser.h | | |-- antsMatrixUtilities.h | | |-- antsMatrixUtilities.hxx | | |-- antsSCCANObject.h | | |-- antsSCCANObject.hxx | | |-- itkAdaptiveNonLocalMeansDenoisingImageFilter.h | | |-- itkAdaptiveNonLocalMeansDenoisingImageFilter.hxx | | |-- itkAlternatingValueDifferenceImageFilter.h | | |-- itkAlternatingValueDifferenceImageFilter.hxx | | |-- itkAlternatingValueSimpleSubtractionImageFilter.h | | |-- itkAlternatingValueSimpleSubtractionImageFilter.hxx | | |-- itkAverageAffineTransformFunction.h | | |-- itkAverageAffineTransformFunction.hxx | | |-- itkAverageAffineTransformNoRigidFunction.h | | |-- itkAverageAffineTransformNoRigidFunction.hxx | | |-- itkAverageOverDimensionImageFilter.h | | |-- itkAverageOverDimensionImageFilter.hxx | | |-- itkComposeDiffeomorphismsImageFilter.h | | |-- itkComposeDiffeomorphismsImageFilter.hxx | | |-- itkDecomposeTensorFunction.h | | |-- itkDecomposeTensorFunction.hxx | | |-- itkDeformationFieldGradientTensorImageFilter.h | | |-- itkDeformationFieldGradientTensorImageFilter.hxx | | |-- itkDeterminantTensorImageFilter.h | | |-- itkDeterminantTensorImageFilter.hxx | | |-- itkDiReCTImageFilter.h | | |-- itkDiReCTImageFilter.hxx | | |-- itkDisplacementFieldFromMultiTransformFilter.h | | |-- itkGeneralToBSplineDisplacementFieldFilter.h | | |-- itkGeneralToBSplineDisplacementFieldFilter.hxx | | |-- itkGeometricJacobianDeterminantImageFilter.h | | |-- itkGeometricJacobianDeterminantImageFilter.hxx | | |-- itkImageIntensityAndGradientToPointSetFilter.h | | |-- itkImageIntensityAndGradientToPointSetFilter.hxx | | |-- itkLabelPerimeterEstimationCalculator.h | | |-- itkLabelPerimeterEstimationCalculator.hxx | | |-- itkLabeledPointSetFileReader.h | | |-- itkLabeledPointSetFileReader.hxx | | |-- itkLabeledPointSetFileWriter.h | | |-- itkLabeledPointSetFileWriter.hxx | | |-- itkManifoldParzenWindowsPointSetFunction.h | | |-- itkManifoldParzenWindowsPointSetFunction.hxx | | |-- itkMaskedSmoothingImageFilter.h | | |-- itkMaskedSmoothingImageFilter.hxx | | |-- itkMultiScaleLaplacianBlobDetectorImageFilter.h | | |-- itkMultiScaleLaplacianBlobDetectorImageFilter.hxx | | |-- itkMultiplyByConstantVectorImageFilter.h | | |-- itkN3MRIBiasFieldCorrectionImageFilter.h | | |-- itkN3MRIBiasFieldCorrectionImageFilter.hxx | | |-- itkNeighborhoodFirstOrderStatisticsImageFilter.h | | |-- itkNonLocalPatchBasedImageFilter.h | | |-- itkNonLocalPatchBasedImageFilter.hxx | | |-- itkNonLocalSuperresolutionImageFilter.h | | |-- itkNonLocalSuperresolutionImageFilter.hxx | | |-- itkOptimalSharpeningImageFilter.h | | |-- itkOptimalSharpeningImageFilter.hxx | | |-- itkPointSetFunction.h | | |-- itkPointSetFunction.hxx | | |-- itkPseudoContinuousArterialSpinLabeledCerebralBloodFlowImageFilter.h | | |-- itkPseudoContinuousArterialSpinLabeledCerebralBloodFlowImageFilter.hxx | | |-- itkPulsedArterialSpinLabeledCerebralBloodFlowImageFilter.h | | |-- itkPulsedArterialSpinLabeledCerebralBloodFlowImageFilter.hxx | | |-- itkSimulatedBSplineDisplacementFieldSource.h | | |-- itkSimulatedBSplineDisplacementFieldSource.hxx | | |-- itkSimulatedDisplacementFieldSource.h | | |-- itkSimulatedDisplacementFieldSource.hxx | | |-- itkSimulatedExponentialDisplacementFieldSource.h | | |-- itkSimulatedExponentialDisplacementFieldSource.hxx | | |-- itkSliceTimingCorrectionImageFilter.h | | |-- itkSliceTimingCorrectionImageFilter.hxx | | |-- itkSplitAlternatingTimeSeriesImageFilter.h | | |-- itkSplitAlternatingTimeSeriesImageFilter.hxx | | |-- itkSurfaceCurvatureBase.h | | |-- itkSurfaceCurvatureBase.hxx | | |-- itkSurfaceImageCurvature.h | | |-- itkSurfaceImageCurvature.hxx | | |-- itkSurfaceMeshCurvature.h | | |-- itkTextureHistogram.h | | |-- itkVarianceImageFilter.h | | |-- itkVarianceImageFilter.hxx | | |-- itkVectorFieldGradientImageFunction.h | | |-- itkVectorFieldGradientImageFunction.hxx | | |-- itkVectorGaussianInterpolateImageFunction.h | | |-- itkVectorImageFileReader.h | | |-- itkVectorImageFileReader.hxx | | |-- itkVectorImageFileWriter.h | | |-- itkVectorImageFileWriter.hxx | | |-- itkWarpImageMultiTransformFilter.h | | |-- itkWarpImageMultiTransformFilter.hxx | | |-- itkWarpImageWAffineFilter.h | | |-- itkWarpImageWAffineFilter.hxx | | |-- itkWarpTensorImageMultiTransformFilter.h | | |-- itkWarpTensorImageMultiTransformFilter.hxx | | `-- itkantsReadWriteTransform.h | |-- Version.cmake | |-- _config.yml | |-- antsRegistrationCLP | | |-- CMakeLists.txt | | |-- antsRegistrationCLP.cxx | | `-- antsRegistrationCLP.xml | |-- appveyor.yml | |-- buildscripts | | `-- travis-command-wrapper.py | |-- forhtml | | |-- README | | |-- ants.bib | | |-- ants_progress_report.Rmd | | |-- nazca-1.jpg | | `-- push-website | |-- index.html | `-- index.md `-- ants-9999_build |-- ANTS-build | |-- ANTsVersionConfig.h | |-- CMakeCache.txt | |-- CMakeFiles | | |-- 3.15.3 | | | |-- CMakeCCompiler.cmake | | | |-- CMakeCXXCompiler.cmake | | | |-- CMakeDetermineCompilerABI_C.bin | | | |-- CMakeDetermineCompilerABI_CXX.bin | | | |-- CMakeSystem.cmake | | | |-- CompilerIdC | | | | |-- CMakeCCompilerId.c | | | | |-- a.out | | | | `-- tmp | | | `-- CompilerIdCXX | | | |-- CMakeCXXCompilerId.cpp | | | |-- a.out | | | `-- tmp | | |-- CMakeDirectoryInformation.cmake | | |-- CMakeError.log | | |-- CMakeOutput.log | | |-- CMakeTmp | | |-- Makefile.cmake | | |-- Makefile2 | | |-- TargetDirectories.txt | | |-- cmake.check_cache | | |-- git-data | | | `-- HEAD | | `-- progress.marks | |-- CPackConfig.cmake | |-- CPackSourceConfig.cmake | |-- CTestCustom.cmake | |-- CTestTestfile.cmake | |-- Examples | | |-- ANTS | | |-- ANTSIntegrateVectorField | | |-- ANTSIntegrateVelocityField | | |-- ANTSJacobian | | |-- ANTSUseDeformationFieldToGetAffineTransform | | |-- ANTSUseLandmarkImagesToGetAffineTransform | | |-- ANTSUseLandmarkImagesToGetBSplineDisplacementField | | |-- Atropos | | |-- AverageAffineTransform | | |-- AverageAffineTransformNoRigid | | |-- AverageImages | | |-- AverageTensorImages | | |-- CMakeFiles | | | |-- ANTS.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_ANTS.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- ANTSIntegrateVectorField.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_ANTSIntegrateVectorField.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- ANTSIntegrateVelocityField.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_ANTSIntegrateVelocityField.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- ANTSJacobian.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_ANTSJacobian.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- ANTSUseDeformationFieldToGetAffineTransform.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_ANTSUseDeformationFieldToGetAffineTransform.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- ANTSUseLandmarkImagesToGetAffineTransform.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_ANTSUseLandmarkImagesToGetAffineTransform.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- ANTSUseLandmarkImagesToGetBSplineDisplacementField.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_ANTSUseLandmarkImagesToGetBSplineDisplacementField.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- Atropos.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_Atropos.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- AverageAffineTransform.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_AverageAffineTransform.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- AverageAffineTransformNoRigid.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_AverageAffineTransformNoRigid.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- AverageImages.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_AverageImages.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- AverageTensorImages.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_AverageTensorImages.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- CMakeDirectoryInformation.cmake | | | |-- ClusterImageStatistics.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_ClusterImageStatistics.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- ComposeMultiTransform.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_ComposeMultiTransform.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- CompositeTransformUtil.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_CompositeTransformUtil.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- ConvertImage.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_ConvertImage.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- ConvertImagePixelType.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_ConvertImagePixelType.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- ConvertInputImagePixelTypeToFloat.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_ConvertInputImagePixelTypeToFloat.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- ConvertScalarImageToRGB.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_ConvertScalarImageToRGB.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- ConvertToJpg.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_ConvertToJpg.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- ConvertTransformFile.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_ConvertTransformFile.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- CopyImageHeaderInformation.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_CopyImageHeaderInformation.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- CreateDTICohort.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_CreateDTICohort.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- CreateDisplacementField.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_CreateDisplacementField.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- CreateImage.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_CreateImage.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- CreateJacobianDeterminantImage.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_CreateJacobianDeterminantImage.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- CreateTiledMosaic.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_CreateTiledMosaic.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- CreateWarpedGridImage.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_CreateWarpedGridImage.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- DeNrrd.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_DeNrrd.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- DenoiseImage.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_DenoiseImage.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- ExtractRegionFromImage.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_ExtractRegionFromImage.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- ExtractRegionFromImageByMask.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_ExtractRegionFromImageByMask.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- ExtractSliceFromImage.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_ExtractSliceFromImage.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- FitBSplineToPoints.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_FitBSplineToPoints.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- GetConnectedComponentsFeatureImages.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_GetConnectedComponentsFeatureImages.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- ImageCompare.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_ImageCompare.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- ImageIntensityStatistics.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_ImageIntensityStatistics.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- ImageMath.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_ImageMath.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- ImageSetStatistics.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_ImageSetStatistics.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- KellyKapowski.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_KellyKapowski.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- KellySlater.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_KellySlater.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- LabelClustersUniquely.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_LabelClustersUniquely.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- LabelGeometryMeasures.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_LabelGeometryMeasures.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- LabelOverlapMeasures.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_LabelOverlapMeasures.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- LaplacianThickness.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_LaplacianThickness.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- LesionFilling.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_LesionFilling.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- MeasureImageSimilarity.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_MeasureImageSimilarity.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- MeasureMinMaxMean.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_MeasureMinMaxMean.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- MemoryTest.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_MemoryTest.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- MultiplyImages.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_MultiplyImages.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- N3BiasFieldCorrection.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_N3BiasFieldCorrection.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- N4BiasFieldCorrection.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_N4BiasFieldCorrection.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- NonLocalSuperResolution.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_NonLocalSuperResolution.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- PasteImageIntoImage.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_PasteImageIntoImage.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- PermuteFlipImageOrientationAxes.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_PermuteFlipImageOrientationAxes.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- PrintHeader.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_PrintHeader.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- RebaseTensorImage.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_RebaseTensorImage.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- ReorientTensorImage.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_ReorientTensorImage.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- ResampleImage.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_ResampleImage.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- ResampleImageBySpacing.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_ResampleImageBySpacing.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- ResetDirection.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_ResetDirection.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- SetDirectionByMatrix.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_SetDirectionByMatrix.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- SetOrigin.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_SetOrigin.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- SetSpacing.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_SetSpacing.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- SimulateDisplacementField.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_SimulateDisplacementField.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- SmoothDisplacementField.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_SmoothDisplacementField.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- SmoothImage.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_SmoothImage.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- StackSlices.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_StackSlices.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- SuperResolution.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_SuperResolution.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- SurfaceBasedSmoothing.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_SurfaceBasedSmoothing.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- SurfaceCurvature.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_SurfaceCurvature.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- TextureCooccurrenceFeatures.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_TextureCooccurrenceFeatures.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- TextureRunLengthFeatures.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_TextureRunLengthFeatures.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- ThresholdImage.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_ThresholdImage.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- TileImages.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_TileImages.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- TimeSCCAN.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_TimeSCCAN.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- WarpImageMultiTransform.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_WarpImageMultiTransform.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- WarpTensorImageMultiTransform.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_WarpTensorImageMultiTransform.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- WarpTimeSeriesImageMultiTransform.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_WarpTimeSeriesImageMultiTransform.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- antsAI.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_antsAI.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- antsAffineInitializer.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_antsAffineInitializer.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- antsAlignOrigin.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_antsAlignOrigin.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- antsApplyTransforms.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_antsApplyTransforms.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- antsApplyTransformsToPoints.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_antsApplyTransformsToPoints.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- antsJointFusion.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_antsJointFusion.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- antsJointTensorFusion.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_antsJointTensorFusion.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- antsLandmarkBasedTransformInitializer.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_antsLandmarkBasedTransformInitializer.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- antsMotionCorr.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_antsMotionCorr.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- antsMotionCorrDiffusionDirection.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_antsMotionCorrDiffusionDirection.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- antsMotionCorrStats.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_antsMotionCorrStats.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- antsRegistration.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_antsRegistration.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- antsSliceRegularizedRegistration.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_antsSliceRegularizedRegistration.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- antsTransformInfo.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_antsTransformInfo.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- antsUtilities.dir | | | | |-- ANTsVersion.cxx.o | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- ImageMathHelper.cxx.o | | | | |-- ImageMathHelper2D.cxx.o | | | | |-- ImageMathHelper3D.cxx.o | | | | |-- ImageMathHelper4D.cxx.o | | | | |-- __ | | | | | `-- Utilities | | | | | |-- ReadWriteData.cxx.o | | | | | |-- antsCommandLineOption.cxx.o | | | | | `-- antsCommandLineParser.cxx.o | | | | |-- antsRegistration2DDouble.cxx.o | | | | |-- antsRegistration2DFloat.cxx.o | | | | |-- antsRegistration3DDouble.cxx.o | | | | |-- antsRegistration3DFloat.cxx.o | | | | |-- antsRegistration4DDouble.cxx.o | | | | |-- antsRegistration4DFloat.cxx.o | | | | |-- antsRegistrationTemplateHeader.cxx.o | | | | |-- antsUtilities.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- antsUtilitiesTesting.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_antsUtilitiesTesting.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- compareTwoTransforms.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_compareTwoTransforms.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- iMath.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_iMath.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_ANTS.dir | | | | |-- ANTS.cxx.o | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_ANTSIntegrateVectorField.dir | | | | |-- ANTSIntegrateVectorField.cxx.o | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_ANTSIntegrateVelocityField.dir | | | | |-- ANTSIntegrateVelocityField.cxx.o | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_ANTSJacobian.dir | | | | |-- ANTSJacobian.cxx.o | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_ANTSUseDeformationFieldToGetAffineTransform.dir | | | | |-- ANTSUseDeformationFieldToGetAffineTransform.cxx.o | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_ANTSUseLandmarkImagesToGetAffineTransform.dir | | | | |-- ANTSUseLandmarkImagesToGetAffineTransform.cxx.o | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_ANTSUseLandmarkImagesToGetBSplineDisplacementField.dir | | | | |-- ANTSUseLandmarkImagesToGetBSplineDisplacementField.cxx.o | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_Atropos.dir | | | | |-- Atropos.cxx.o | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_AverageAffineTransform.dir | | | | |-- AverageAffineTransform.cxx.o | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_AverageAffineTransformNoRigid.dir | | | | |-- AverageAffineTransformNoRigid.cxx.o | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_AverageImages.dir | | | | |-- AverageImages.cxx.o | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_AverageTensorImages.dir | | | | |-- AverageTensorImages.cxx.o | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_ClusterImageStatistics.dir | | | | |-- CXX.includecache | | | | |-- ClusterImageStatistics.cxx.o | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_ComposeMultiTransform.dir | | | | |-- CXX.includecache | | | | |-- ComposeMultiTransform.cxx.o | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_CompositeTransformUtil.dir | | | | |-- CXX.includecache | | | | |-- CompositeTransformUtil.cxx.o | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_ConvertImage.dir | | | | |-- CXX.includecache | | | | |-- ConvertImage.cxx.o | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_ConvertImagePixelType.dir | | | | |-- CXX.includecache | | | | |-- ConvertImagePixelType.cxx.o | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_ConvertInputImagePixelTypeToFloat.dir | | | | |-- CXX.includecache | | | | |-- ConvertInputImagePixelTypeToFloat.cxx.o | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_ConvertScalarImageToRGB.dir | | | | |-- CXX.includecache | | | | |-- ConvertScalarImageToRGB.cxx.o | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_ConvertToJpg.dir | | | | |-- CXX.includecache | | | | |-- ConvertToJpg.cxx.o | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_ConvertTransformFile.dir | | | | |-- CXX.includecache | | | | |-- ConvertTransformFile.cxx.o | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_CopyImageHeaderInformation.dir | | | | |-- CXX.includecache | | | | |-- CopyImageHeaderInformation.cxx.o | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_CreateDTICohort.dir | | | | |-- CXX.includecache | | | | |-- CreateDTICohort.cxx.o | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_CreateDisplacementField.dir | | | | |-- CXX.includecache | | | | |-- CreateDisplacementField.cxx.o | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_CreateImage.dir | | | | |-- CXX.includecache | | | | |-- CreateImage.cxx.o | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_CreateJacobianDeterminantImage.dir | | | | |-- CXX.includecache | | | | |-- CreateJacobianDeterminantImage.cxx.o | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_CreateTiledMosaic.dir | | | | |-- CXX.includecache | | | | |-- CreateTiledMosaic.cxx.o | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_CreateWarpedGridImage.dir | | | | |-- CXX.includecache | | | | |-- CreateWarpedGridImage.cxx.o | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_DeNrrd.dir | | | | |-- CXX.includecache | | | | |-- DeNrrd.cxx.o | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_DenoiseImage.dir | | | | |-- CXX.includecache | | | | |-- DenoiseImage.cxx.o | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_ExtractRegionFromImage.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- ExtractRegionFromImage.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_ExtractRegionFromImageByMask.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- ExtractRegionFromImageByMask.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_ExtractSliceFromImage.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- ExtractSliceFromImage.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_FitBSplineToPoints.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- FitBSplineToPoints.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_GetConnectedComponentsFeatureImages.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- GetConnectedComponentsFeatureImages.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_ImageCompare.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- ImageCompare.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_ImageIntensityStatistics.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- ImageIntensityStatistics.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_ImageMath.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- ImageMath.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_ImageSetStatistics.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- ImageSetStatistics.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_KellyKapowski.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- KellyKapowski.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_KellySlater.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- KellySlater.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_LabelClustersUniquely.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- LabelClustersUniquely.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_LabelGeometryMeasures.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- LabelGeometryMeasures.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_LabelOverlapMeasures.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- LabelOverlapMeasures.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_LaplacianThickness.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- LaplacianThickness.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_LesionFilling.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- LesionFilling.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_MeasureImageSimilarity.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- MeasureImageSimilarity.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_MeasureMinMaxMean.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- MeasureMinMaxMean.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_MemoryTest.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- MemoryTest.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_MultiplyImages.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- MultiplyImages.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_N3BiasFieldCorrection.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- N3BiasFieldCorrection.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_N4BiasFieldCorrection.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- N4BiasFieldCorrection.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_NonLocalSuperResolution.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- NonLocalSuperResolution.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_PasteImageIntoImage.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- PasteImageIntoImage.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_PermuteFlipImageOrientationAxes.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- PermuteFlipImageOrientationAxes.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_PrintHeader.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- PrintHeader.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_RebaseTensorImage.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- RebaseTensorImage.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_ReorientTensorImage.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- ReorientTensorImage.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_ResampleImage.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- ResampleImage.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_ResampleImageBySpacing.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- ResampleImageBySpacing.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_ResetDirection.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- ResetDirection.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_SetDirectionByMatrix.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- SetDirectionByMatrix.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_SetOrigin.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- SetOrigin.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_SetSpacing.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- SetSpacing.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_SimulateDisplacementField.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- SimulateDisplacementField.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_SmoothDisplacementField.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- SmoothDisplacementField.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_SmoothImage.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- SmoothImage.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_StackSlices.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- StackSlices.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_SuperResolution.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- SuperResolution.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_SurfaceBasedSmoothing.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- SurfaceBasedSmoothing.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_SurfaceCurvature.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- SurfaceCurvature.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_TextureCooccurrenceFeatures.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- TextureCooccurrenceFeatures.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_TextureRunLengthFeatures.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- TextureRunLengthFeatures.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_ThresholdImage.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- ThresholdImage.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_TileImages.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- TileImages.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_TimeSCCAN.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- TimeSCCAN.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_WarpImageMultiTransform.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- WarpImageMultiTransform.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_WarpTensorImageMultiTransform.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- WarpTensorImageMultiTransform.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_WarpTimeSeriesImageMultiTransform.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- WarpTimeSeriesImageMultiTransform.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_antsAI.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- antsAI.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_antsAffineInitializer.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- antsAffineInitializer.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_antsAlignOrigin.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- antsAlignOrigin.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_antsApplyTransforms.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- antsApplyTransforms.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_antsApplyTransformsToPoints.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- antsApplyTransformsToPoints.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_antsJointFusion.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- antsJointFusion.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_antsJointTensorFusion.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- antsJointTensorFusion.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_antsLandmarkBasedTransformInitializer.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- antsLandmarkBasedTransformInitializer.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_antsMotionCorr.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- antsMotionCorr.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_antsMotionCorrDiffusionDirection.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- antsMotionCorrDiffusionDirection.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_antsMotionCorrStats.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- antsMotionCorrStats.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_antsRegistration.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- antsRegistration.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_antsSliceRegularizedRegistration.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- antsSliceRegularizedRegistration.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_antsTransformInfo.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- antsTransformInfo.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_antsUtilitiesTesting.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- antsUtilitiesTesting.cxx.o | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_compareTwoTransforms.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- compareTwoTransforms.cxx.o | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_iMath.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- iMath.cxx.o | | | | |-- link.txt | | | | `-- progress.make | | | |-- l_sccan.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | |-- progress.make | | | | `-- sccan.cxx.o | | | |-- l_simpleSynRegistration.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | |-- progress.make | | | | `-- simpleSynRegistration.cxx.o | | | |-- progress.marks | | | |-- sccan.dir | | | | |-- CXX.includecache | | | | |-- DependInfo.cmake | | | | |-- build.make | | | | |-- cli_sccan.cxx.o | | | | |-- cmake_clean.cmake | | | | |-- depend.internal | | | | |-- depend.make | | | | |-- flags.make | | | | |-- link.txt | | | | `-- progress.make | | | `-- simpleSynRegistration.dir | | | |-- CXX.includecache | | | |-- DependInfo.cmake | | | |-- build.make | | | |-- cli_simpleSynRegistration.cxx.o | | | |-- cmake_clean.cmake | | | |-- depend.internal | | | |-- depend.make | | | |-- flags.make | | | |-- link.txt | | | `-- progress.make | | |-- CTestTestfile.cmake | | |-- ClusterImageStatistics | | |-- ComposeMultiTransform | | |-- CompositeTransformUtil | | |-- ConvertImage | | |-- ConvertImagePixelType | | |-- ConvertInputImagePixelTypeToFloat | | |-- ConvertScalarImageToRGB | | |-- ConvertToJpg | | |-- ConvertTransformFile | | |-- CopyImageHeaderInformation | | |-- CreateDTICohort | | |-- CreateDisplacementField | | |-- CreateImage | | |-- CreateJacobianDeterminantImage | | |-- CreateTiledMosaic | | |-- CreateWarpedGridImage | | |-- DeNrrd | | |-- DenoiseImage | | |-- ExtractRegionFromImage | | |-- ExtractRegionFromImageByMask | | |-- ExtractSliceFromImage | | |-- FitBSplineToPoints | | |-- GetConnectedComponentsFeatureImages | | |-- ImageCompare | | |-- ImageIntensityStatistics | | |-- ImageMath | | |-- ImageSetStatistics | | |-- KellyKapowski | | |-- KellySlater | | |-- LabelClustersUniquely | | |-- LabelGeometryMeasures | | |-- LabelOverlapMeasures | | |-- LaplacianThickness | | |-- LesionFilling | | |-- Makefile | | |-- MeasureImageSimilarity | | |-- MeasureMinMaxMean | | |-- MemoryTest | | |-- MultiplyImages | | |-- N3BiasFieldCorrection | | |-- N4BiasFieldCorrection | | |-- NonLocalSuperResolution | | |-- PasteImageIntoImage | | |-- PermuteFlipImageOrientationAxes | | |-- PrintHeader | | |-- RebaseTensorImage | | |-- ReorientTensorImage | | |-- ResampleImage | | |-- ResampleImageBySpacing | | |-- ResetDirection | | |-- SetDirectionByMatrix | | |-- SetOrigin | | |-- SetSpacing | | |-- SimulateDisplacementField | | |-- SmoothDisplacementField | | |-- SmoothImage | | |-- StackSlices | | |-- SuperResolution | | |-- SurfaceBasedSmoothing | | |-- SurfaceCurvature | | |-- TextureCooccurrenceFeatures | | |-- TextureRunLengthFeatures | | |-- ThresholdImage | | |-- TileImages | | |-- TimeSCCAN | | |-- WarpImageMultiTransform | | |-- WarpTensorImageMultiTransform | | |-- WarpTimeSeriesImageMultiTransform | | |-- antsAI | | |-- antsAffineInitializer | | |-- antsAlignOrigin | | |-- antsApplyTransforms | | |-- antsApplyTransformsToPoints | | |-- antsJointFusion | | |-- antsJointTensorFusion | | |-- antsLandmarkBasedTransformInitializer | | |-- antsMotionCorr | | |-- antsMotionCorrDiffusionDirection | | |-- antsMotionCorrStats | | |-- antsRegistration | | |-- antsSliceRegularizedRegistration | | |-- antsTransformInfo | | |-- antsUtilitiesTesting | | |-- cli_ANTS.cxx | | |-- cli_ANTSIntegrateVectorField.cxx | | |-- cli_ANTSIntegrateVelocityField.cxx | | |-- cli_ANTSJacobian.cxx | | |-- cli_ANTSUseDeformationFieldToGetAffineTransform.cxx | | |-- cli_ANTSUseLandmarkImagesToGetAffineTransform.cxx | | |-- cli_ANTSUseLandmarkImagesToGetBSplineDisplacementField.cxx | | |-- cli_Atropos.cxx | | |-- cli_AverageAffineTransform.cxx | | |-- cli_AverageAffineTransformNoRigid.cxx | | |-- cli_AverageImages.cxx | | |-- cli_AverageTensorImages.cxx | | |-- cli_ClusterImageStatistics.cxx | | |-- cli_ComposeMultiTransform.cxx | | |-- cli_CompositeTransformUtil.cxx | | |-- cli_ConvertImage.cxx | | |-- cli_ConvertImagePixelType.cxx | | |-- cli_ConvertInputImagePixelTypeToFloat.cxx | | |-- cli_ConvertScalarImageToRGB.cxx | | |-- cli_ConvertToJpg.cxx | | |-- cli_ConvertTransformFile.cxx | | |-- cli_CopyImageHeaderInformation.cxx | | |-- cli_CreateDTICohort.cxx | | |-- cli_CreateDisplacementField.cxx | | |-- cli_CreateImage.cxx | | |-- cli_CreateJacobianDeterminantImage.cxx | | |-- cli_CreateTiledMosaic.cxx | | |-- cli_CreateWarpedGridImage.cxx | | |-- cli_DeNrrd.cxx | | |-- cli_DenoiseImage.cxx | | |-- cli_ExtractRegionFromImage.cxx | | |-- cli_ExtractRegionFromImageByMask.cxx | | |-- cli_ExtractSliceFromImage.cxx | | |-- cli_FitBSplineToPoints.cxx | | |-- cli_GetConnectedComponentsFeatureImages.cxx | | |-- cli_ImageCompare.cxx | | |-- cli_ImageIntensityStatistics.cxx | | |-- cli_ImageMath.cxx | | |-- cli_ImageSetStatistics.cxx | | |-- cli_KellyKapowski.cxx | | |-- cli_KellySlater.cxx | | |-- cli_LabelClustersUniquely.cxx | | |-- cli_LabelGeometryMeasures.cxx | | |-- cli_LabelOverlapMeasures.cxx | | |-- cli_LaplacianThickness.cxx | | |-- cli_LesionFilling.cxx | | |-- cli_MeasureImageSimilarity.cxx | | |-- cli_MeasureMinMaxMean.cxx | | |-- cli_MemoryTest.cxx | | |-- cli_MultiplyImages.cxx | | |-- cli_N3BiasFieldCorrection.cxx | | |-- cli_N4BiasFieldCorrection.cxx | | |-- cli_NonLocalSuperResolution.cxx | | |-- cli_PasteImageIntoImage.cxx | | |-- cli_PermuteFlipImageOrientationAxes.cxx | | |-- cli_PrintHeader.cxx | | |-- cli_RebaseTensorImage.cxx | | |-- cli_ReorientTensorImage.cxx | | |-- cli_ResampleImage.cxx | | |-- cli_ResampleImageBySpacing.cxx | | |-- cli_ResetDirection.cxx | | |-- cli_SetDirectionByMatrix.cxx | | |-- cli_SetOrigin.cxx | | |-- cli_SetSpacing.cxx | | |-- cli_SimulateDisplacementField.cxx | | |-- cli_SmoothDisplacementField.cxx | | |-- cli_SmoothImage.cxx | | |-- cli_StackSlices.cxx | | |-- cli_SuperResolution.cxx | | |-- cli_SurfaceBasedSmoothing.cxx | | |-- cli_SurfaceCurvature.cxx | | |-- cli_TextureCooccurrenceFeatures.cxx | | |-- cli_TextureRunLengthFeatures.cxx | | |-- cli_ThresholdImage.cxx | | |-- cli_TileImages.cxx | | |-- cli_TimeSCCAN.cxx | | |-- cli_WarpImageMultiTransform.cxx | | |-- cli_WarpTensorImageMultiTransform.cxx | | |-- cli_WarpTimeSeriesImageMultiTransform.cxx | | |-- cli_antsAI.cxx | | |-- cli_antsAffineInitializer.cxx | | |-- cli_antsAlignOrigin.cxx | | |-- cli_antsApplyTransforms.cxx | | |-- cli_antsApplyTransformsToPoints.cxx | | |-- cli_antsJointFusion.cxx | | |-- cli_antsJointTensorFusion.cxx | | |-- cli_antsLandmarkBasedTransformInitializer.cxx | | |-- cli_antsMotionCorr.cxx | | |-- cli_antsMotionCorrDiffusionDirection.cxx | | |-- cli_antsMotionCorrStats.cxx | | |-- cli_antsRegistration.cxx | | |-- cli_antsSliceRegularizedRegistration.cxx | | |-- cli_antsTransformInfo.cxx | | |-- cli_antsUtilitiesTesting.cxx | | |-- cli_compareTwoTransforms.cxx | | |-- cli_iMath.cxx | | |-- cli_sccan.cxx | | |-- cli_simpleSynRegistration.cxx | | |-- cmake_install.cmake | | |-- compareTwoTransforms | | |-- iMath | | |-- libantsUtilities.so | | |-- libl_ANTS.so -> libl_ANTS.so.2 | | |-- libl_ANTS.so.2 -> libl_ANTS.so.2.3.1.dev37-gf78b2 | | |-- libl_ANTS.so.2.3.1.dev37-gf78b2 | | |-- libl_ANTSIntegrateVectorField.so -> libl_ANTSIntegrateVectorField.so.2 | | |-- libl_ANTSIntegrateVectorField.so.2 -> libl_ANTSIntegrateVectorField.so.2.3.1.dev37-gf78b2 | | |-- libl_ANTSIntegrateVectorField.so.2.3.1.dev37-gf78b2 | | |-- libl_ANTSIntegrateVelocityField.so -> libl_ANTSIntegrateVelocityField.so.2 | | |-- libl_ANTSIntegrateVelocityField.so.2 -> libl_ANTSIntegrateVelocityField.so.2.3.1.dev37-gf78b2 | | |-- libl_ANTSIntegrateVelocityField.so.2.3.1.dev37-gf78b2 | | |-- libl_ANTSJacobian.so -> libl_ANTSJacobian.so.2 | | |-- libl_ANTSJacobian.so.2 -> libl_ANTSJacobian.so.2.3.1.dev37-gf78b2 | | |-- libl_ANTSJacobian.so.2.3.1.dev37-gf78b2 | | |-- libl_ANTSUseDeformationFieldToGetAffineTransform.so -> libl_ANTSUseDeformationFieldToGetAffineTransform.so.2 | | |-- libl_ANTSUseDeformationFieldToGetAffineTransform.so.2 -> libl_ANTSUseDeformationFieldToGetAffineTransform.so.2.3.1.dev37-gf78b2 | | |-- libl_ANTSUseDeformationFieldToGetAffineTransform.so.2.3.1.dev37-gf78b2 | | |-- libl_ANTSUseLandmarkImagesToGetAffineTransform.so -> libl_ANTSUseLandmarkImagesToGetAffineTransform.so.2 | | |-- libl_ANTSUseLandmarkImagesToGetAffineTransform.so.2 -> libl_ANTSUseLandmarkImagesToGetAffineTransform.so.2.3.1.dev37-gf78b2 | | |-- libl_ANTSUseLandmarkImagesToGetAffineTransform.so.2.3.1.dev37-gf78b2 | | |-- libl_ANTSUseLandmarkImagesToGetBSplineDisplacementField.so -> libl_ANTSUseLandmarkImagesToGetBSplineDisplacementField.so.2 | | |-- libl_ANTSUseLandmarkImagesToGetBSplineDisplacementField.so.2 -> libl_ANTSUseLandmarkImagesToGetBSplineDisplacementField.so.2.3.1.dev37-gf78b2 | | |-- libl_ANTSUseLandmarkImagesToGetBSplineDisplacementField.so.2.3.1.dev37-gf78b2 | | |-- libl_Atropos.so -> libl_Atropos.so.2 | | |-- libl_Atropos.so.2 -> libl_Atropos.so.2.3.1.dev37-gf78b2 | | |-- libl_Atropos.so.2.3.1.dev37-gf78b2 | | |-- libl_AverageAffineTransform.so -> libl_AverageAffineTransform.so.2 | | |-- libl_AverageAffineTransform.so.2 -> libl_AverageAffineTransform.so.2.3.1.dev37-gf78b2 | | |-- libl_AverageAffineTransform.so.2.3.1.dev37-gf78b2 | | |-- libl_AverageAffineTransformNoRigid.so -> libl_AverageAffineTransformNoRigid.so.2 | | |-- libl_AverageAffineTransformNoRigid.so.2 -> libl_AverageAffineTransformNoRigid.so.2.3.1.dev37-gf78b2 | | |-- libl_AverageAffineTransformNoRigid.so.2.3.1.dev37-gf78b2 | | |-- libl_AverageImages.so -> libl_AverageImages.so.2 | | |-- libl_AverageImages.so.2 -> libl_AverageImages.so.2.3.1.dev37-gf78b2 | | |-- libl_AverageImages.so.2.3.1.dev37-gf78b2 | | |-- libl_AverageTensorImages.so -> libl_AverageTensorImages.so.2 | | |-- libl_AverageTensorImages.so.2 -> libl_AverageTensorImages.so.2.3.1.dev37-gf78b2 | | |-- libl_AverageTensorImages.so.2.3.1.dev37-gf78b2 | | |-- libl_ClusterImageStatistics.so -> libl_ClusterImageStatistics.so.2 | | |-- libl_ClusterImageStatistics.so.2 -> libl_ClusterImageStatistics.so.2.3.1.dev37-gf78b2 | | |-- libl_ClusterImageStatistics.so.2.3.1.dev37-gf78b2 | | |-- libl_ComposeMultiTransform.so -> libl_ComposeMultiTransform.so.2 | | |-- libl_ComposeMultiTransform.so.2 -> libl_ComposeMultiTransform.so.2.3.1.dev37-gf78b2 | | |-- libl_ComposeMultiTransform.so.2.3.1.dev37-gf78b2 | | |-- libl_CompositeTransformUtil.so -> libl_CompositeTransformUtil.so.2 | | |-- libl_CompositeTransformUtil.so.2 -> libl_CompositeTransformUtil.so.2.3.1.dev37-gf78b2 | | |-- libl_CompositeTransformUtil.so.2.3.1.dev37-gf78b2 | | |-- libl_ConvertImage.so -> libl_ConvertImage.so.2 | | |-- libl_ConvertImage.so.2 -> libl_ConvertImage.so.2.3.1.dev37-gf78b2 | | |-- libl_ConvertImage.so.2.3.1.dev37-gf78b2 | | |-- libl_ConvertImagePixelType.so -> libl_ConvertImagePixelType.so.2 | | |-- libl_ConvertImagePixelType.so.2 -> libl_ConvertImagePixelType.so.2.3.1.dev37-gf78b2 | | |-- libl_ConvertImagePixelType.so.2.3.1.dev37-gf78b2 | | |-- libl_ConvertInputImagePixelTypeToFloat.so -> libl_ConvertInputImagePixelTypeToFloat.so.2 | | |-- libl_ConvertInputImagePixelTypeToFloat.so.2 -> libl_ConvertInputImagePixelTypeToFloat.so.2.3.1.dev37-gf78b2 | | |-- libl_ConvertInputImagePixelTypeToFloat.so.2.3.1.dev37-gf78b2 | | |-- libl_ConvertScalarImageToRGB.so -> libl_ConvertScalarImageToRGB.so.2 | | |-- libl_ConvertScalarImageToRGB.so.2 -> libl_ConvertScalarImageToRGB.so.2.3.1.dev37-gf78b2 | | |-- libl_ConvertScalarImageToRGB.so.2.3.1.dev37-gf78b2 | | |-- libl_ConvertToJpg.so -> libl_ConvertToJpg.so.2 | | |-- libl_ConvertToJpg.so.2 -> libl_ConvertToJpg.so.2.3.1.dev37-gf78b2 | | |-- libl_ConvertToJpg.so.2.3.1.dev37-gf78b2 | | |-- libl_ConvertTransformFile.so -> libl_ConvertTransformFile.so.2 | | |-- libl_ConvertTransformFile.so.2 -> libl_ConvertTransformFile.so.2.3.1.dev37-gf78b2 | | |-- libl_ConvertTransformFile.so.2.3.1.dev37-gf78b2 | | |-- libl_CopyImageHeaderInformation.so -> libl_CopyImageHeaderInformation.so.2 | | |-- libl_CopyImageHeaderInformation.so.2 -> libl_CopyImageHeaderInformation.so.2.3.1.dev37-gf78b2 | | |-- libl_CopyImageHeaderInformation.so.2.3.1.dev37-gf78b2 | | |-- libl_CreateDTICohort.so -> libl_CreateDTICohort.so.2 | | |-- libl_CreateDTICohort.so.2 -> libl_CreateDTICohort.so.2.3.1.dev37-gf78b2 | | |-- libl_CreateDTICohort.so.2.3.1.dev37-gf78b2 | | |-- libl_CreateDisplacementField.so -> libl_CreateDisplacementField.so.2 | | |-- libl_CreateDisplacementField.so.2 -> libl_CreateDisplacementField.so.2.3.1.dev37-gf78b2 | | |-- libl_CreateDisplacementField.so.2.3.1.dev37-gf78b2 | | |-- libl_CreateImage.so -> libl_CreateImage.so.2 | | |-- libl_CreateImage.so.2 -> libl_CreateImage.so.2.3.1.dev37-gf78b2 | | |-- libl_CreateImage.so.2.3.1.dev37-gf78b2 | | |-- libl_CreateJacobianDeterminantImage.so -> libl_CreateJacobianDeterminantImage.so.2 | | |-- libl_CreateJacobianDeterminantImage.so.2 -> libl_CreateJacobianDeterminantImage.so.2.3.1.dev37-gf78b2 | | |-- libl_CreateJacobianDeterminantImage.so.2.3.1.dev37-gf78b2 | | |-- libl_CreateTiledMosaic.so -> libl_CreateTiledMosaic.so.2 | | |-- libl_CreateTiledMosaic.so.2 -> libl_CreateTiledMosaic.so.2.3.1.dev37-gf78b2 | | |-- libl_CreateTiledMosaic.so.2.3.1.dev37-gf78b2 | | |-- libl_CreateWarpedGridImage.so -> libl_CreateWarpedGridImage.so.2 | | |-- libl_CreateWarpedGridImage.so.2 -> libl_CreateWarpedGridImage.so.2.3.1.dev37-gf78b2 | | |-- libl_CreateWarpedGridImage.so.2.3.1.dev37-gf78b2 | | |-- libl_DeNrrd.so -> libl_DeNrrd.so.2 | | |-- libl_DeNrrd.so.2 -> libl_DeNrrd.so.2.3.1.dev37-gf78b2 | | |-- libl_DeNrrd.so.2.3.1.dev37-gf78b2 | | |-- libl_DenoiseImage.so -> libl_DenoiseImage.so.2 | | |-- libl_DenoiseImage.so.2 -> libl_DenoiseImage.so.2.3.1.dev37-gf78b2 | | |-- libl_DenoiseImage.so.2.3.1.dev37-gf78b2 | | |-- libl_ExtractRegionFromImage.so -> libl_ExtractRegionFromImage.so.2 | | |-- libl_ExtractRegionFromImage.so.2 -> libl_ExtractRegionFromImage.so.2.3.1.dev37-gf78b2 | | |-- libl_ExtractRegionFromImage.so.2.3.1.dev37-gf78b2 | | |-- libl_ExtractRegionFromImageByMask.so -> libl_ExtractRegionFromImageByMask.so.2 | | |-- libl_ExtractRegionFromImageByMask.so.2 -> libl_ExtractRegionFromImageByMask.so.2.3.1.dev37-gf78b2 | | |-- libl_ExtractRegionFromImageByMask.so.2.3.1.dev37-gf78b2 | | |-- libl_ExtractSliceFromImage.so -> libl_ExtractSliceFromImage.so.2 | | |-- libl_ExtractSliceFromImage.so.2 -> libl_ExtractSliceFromImage.so.2.3.1.dev37-gf78b2 | | |-- libl_ExtractSliceFromImage.so.2.3.1.dev37-gf78b2 | | |-- libl_FitBSplineToPoints.so -> libl_FitBSplineToPoints.so.2 | | |-- libl_FitBSplineToPoints.so.2 -> libl_FitBSplineToPoints.so.2.3.1.dev37-gf78b2 | | |-- libl_FitBSplineToPoints.so.2.3.1.dev37-gf78b2 | | |-- libl_GetConnectedComponentsFeatureImages.so -> libl_GetConnectedComponentsFeatureImages.so.2 | | |-- libl_GetConnectedComponentsFeatureImages.so.2 -> libl_GetConnectedComponentsFeatureImages.so.2.3.1.dev37-gf78b2 | | |-- libl_GetConnectedComponentsFeatureImages.so.2.3.1.dev37-gf78b2 | | |-- libl_ImageCompare.so -> libl_ImageCompare.so.2 | | |-- libl_ImageCompare.so.2 -> libl_ImageCompare.so.2.3.1.dev37-gf78b2 | | |-- libl_ImageCompare.so.2.3.1.dev37-gf78b2 | | |-- libl_ImageIntensityStatistics.so -> libl_ImageIntensityStatistics.so.2 | | |-- libl_ImageIntensityStatistics.so.2 -> libl_ImageIntensityStatistics.so.2.3.1.dev37-gf78b2 | | |-- libl_ImageIntensityStatistics.so.2.3.1.dev37-gf78b2 | | |-- libl_ImageMath.so -> libl_ImageMath.so.2 | | |-- libl_ImageMath.so.2 -> libl_ImageMath.so.2.3.1.dev37-gf78b2 | | |-- libl_ImageMath.so.2.3.1.dev37-gf78b2 | | |-- libl_ImageSetStatistics.so -> libl_ImageSetStatistics.so.2 | | |-- libl_ImageSetStatistics.so.2 -> libl_ImageSetStatistics.so.2.3.1.dev37-gf78b2 | | |-- libl_ImageSetStatistics.so.2.3.1.dev37-gf78b2 | | |-- libl_KellyKapowski.so -> libl_KellyKapowski.so.2 | | |-- libl_KellyKapowski.so.2 -> libl_KellyKapowski.so.2.3.1.dev37-gf78b2 | | |-- libl_KellyKapowski.so.2.3.1.dev37-gf78b2 | | |-- libl_KellySlater.so -> libl_KellySlater.so.2 | | |-- libl_KellySlater.so.2 -> libl_KellySlater.so.2.3.1.dev37-gf78b2 | | |-- libl_KellySlater.so.2.3.1.dev37-gf78b2 | | |-- libl_LabelClustersUniquely.so -> libl_LabelClustersUniquely.so.2 | | |-- libl_LabelClustersUniquely.so.2 -> libl_LabelClustersUniquely.so.2.3.1.dev37-gf78b2 | | |-- libl_LabelClustersUniquely.so.2.3.1.dev37-gf78b2 | | |-- libl_LabelGeometryMeasures.so -> libl_LabelGeometryMeasures.so.2 | | |-- libl_LabelGeometryMeasures.so.2 -> libl_LabelGeometryMeasures.so.2.3.1.dev37-gf78b2 | | |-- libl_LabelGeometryMeasures.so.2.3.1.dev37-gf78b2 | | |-- libl_LabelOverlapMeasures.so -> libl_LabelOverlapMeasures.so.2 | | |-- libl_LabelOverlapMeasures.so.2 -> libl_LabelOverlapMeasures.so.2.3.1.dev37-gf78b2 | | |-- libl_LabelOverlapMeasures.so.2.3.1.dev37-gf78b2 | | |-- libl_LaplacianThickness.so -> libl_LaplacianThickness.so.2 | | |-- libl_LaplacianThickness.so.2 -> libl_LaplacianThickness.so.2.3.1.dev37-gf78b2 | | |-- libl_LaplacianThickness.so.2.3.1.dev37-gf78b2 | | |-- libl_LesionFilling.so -> libl_LesionFilling.so.2 | | |-- libl_LesionFilling.so.2 -> libl_LesionFilling.so.2.3.1.dev37-gf78b2 | | |-- libl_LesionFilling.so.2.3.1.dev37-gf78b2 | | |-- libl_MeasureImageSimilarity.so -> libl_MeasureImageSimilarity.so.2 | | |-- libl_MeasureImageSimilarity.so.2 -> libl_MeasureImageSimilarity.so.2.3.1.dev37-gf78b2 | | |-- libl_MeasureImageSimilarity.so.2.3.1.dev37-gf78b2 | | |-- libl_MeasureMinMaxMean.so -> libl_MeasureMinMaxMean.so.2 | | |-- libl_MeasureMinMaxMean.so.2 -> libl_MeasureMinMaxMean.so.2.3.1.dev37-gf78b2 | | |-- libl_MeasureMinMaxMean.so.2.3.1.dev37-gf78b2 | | |-- libl_MemoryTest.so -> libl_MemoryTest.so.2 | | |-- libl_MemoryTest.so.2 -> libl_MemoryTest.so.2.3.1.dev37-gf78b2 | | |-- libl_MemoryTest.so.2.3.1.dev37-gf78b2 | | |-- libl_MultiplyImages.so -> libl_MultiplyImages.so.2 | | |-- libl_MultiplyImages.so.2 -> libl_MultiplyImages.so.2.3.1.dev37-gf78b2 | | |-- libl_MultiplyImages.so.2.3.1.dev37-gf78b2 | | |-- libl_N3BiasFieldCorrection.so -> libl_N3BiasFieldCorrection.so.2 | | |-- libl_N3BiasFieldCorrection.so.2 -> libl_N3BiasFieldCorrection.so.2.3.1.dev37-gf78b2 | | |-- libl_N3BiasFieldCorrection.so.2.3.1.dev37-gf78b2 | | |-- libl_N4BiasFieldCorrection.so -> libl_N4BiasFieldCorrection.so.2 | | |-- libl_N4BiasFieldCorrection.so.2 -> libl_N4BiasFieldCorrection.so.2.3.1.dev37-gf78b2 | | |-- libl_N4BiasFieldCorrection.so.2.3.1.dev37-gf78b2 | | |-- libl_NonLocalSuperResolution.so -> libl_NonLocalSuperResolution.so.2 | | |-- libl_NonLocalSuperResolution.so.2 -> libl_NonLocalSuperResolution.so.2.3.1.dev37-gf78b2 | | |-- libl_NonLocalSuperResolution.so.2.3.1.dev37-gf78b2 | | |-- libl_PasteImageIntoImage.so -> libl_PasteImageIntoImage.so.2 | | |-- libl_PasteImageIntoImage.so.2 -> libl_PasteImageIntoImage.so.2.3.1.dev37-gf78b2 | | |-- libl_PasteImageIntoImage.so.2.3.1.dev37-gf78b2 | | |-- libl_PermuteFlipImageOrientationAxes.so -> libl_PermuteFlipImageOrientationAxes.so.2 | | |-- libl_PermuteFlipImageOrientationAxes.so.2 -> libl_PermuteFlipImageOrientationAxes.so.2.3.1.dev37-gf78b2 | | |-- libl_PermuteFlipImageOrientationAxes.so.2.3.1.dev37-gf78b2 | | |-- libl_PrintHeader.so -> libl_PrintHeader.so.2 | | |-- libl_PrintHeader.so.2 -> libl_PrintHeader.so.2.3.1.dev37-gf78b2 | | |-- libl_PrintHeader.so.2.3.1.dev37-gf78b2 | | |-- libl_RebaseTensorImage.so -> libl_RebaseTensorImage.so.2 | | |-- libl_RebaseTensorImage.so.2 -> libl_RebaseTensorImage.so.2.3.1.dev37-gf78b2 | | |-- libl_RebaseTensorImage.so.2.3.1.dev37-gf78b2 | | |-- libl_ReorientTensorImage.so -> libl_ReorientTensorImage.so.2 | | |-- libl_ReorientTensorImage.so.2 -> libl_ReorientTensorImage.so.2.3.1.dev37-gf78b2 | | |-- libl_ReorientTensorImage.so.2.3.1.dev37-gf78b2 | | |-- libl_ResampleImage.so -> libl_ResampleImage.so.2 | | |-- libl_ResampleImage.so.2 -> libl_ResampleImage.so.2.3.1.dev37-gf78b2 | | |-- libl_ResampleImage.so.2.3.1.dev37-gf78b2 | | |-- libl_ResampleImageBySpacing.so -> libl_ResampleImageBySpacing.so.2 | | |-- libl_ResampleImageBySpacing.so.2 -> libl_ResampleImageBySpacing.so.2.3.1.dev37-gf78b2 | | |-- libl_ResampleImageBySpacing.so.2.3.1.dev37-gf78b2 | | |-- libl_ResetDirection.so -> libl_ResetDirection.so.2 | | |-- libl_ResetDirection.so.2 -> libl_ResetDirection.so.2.3.1.dev37-gf78b2 | | |-- libl_ResetDirection.so.2.3.1.dev37-gf78b2 | | |-- libl_SetDirectionByMatrix.so -> libl_SetDirectionByMatrix.so.2 | | |-- libl_SetDirectionByMatrix.so.2 -> libl_SetDirectionByMatrix.so.2.3.1.dev37-gf78b2 | | |-- libl_SetDirectionByMatrix.so.2.3.1.dev37-gf78b2 | | |-- libl_SetOrigin.so -> libl_SetOrigin.so.2 | | |-- libl_SetOrigin.so.2 -> libl_SetOrigin.so.2.3.1.dev37-gf78b2 | | |-- libl_SetOrigin.so.2.3.1.dev37-gf78b2 | | |-- libl_SetSpacing.so -> libl_SetSpacing.so.2 | | |-- libl_SetSpacing.so.2 -> libl_SetSpacing.so.2.3.1.dev37-gf78b2 | | |-- libl_SetSpacing.so.2.3.1.dev37-gf78b2 | | |-- libl_SimulateDisplacementField.so -> libl_SimulateDisplacementField.so.2 | | |-- libl_SimulateDisplacementField.so.2 -> libl_SimulateDisplacementField.so.2.3.1.dev37-gf78b2 | | |-- libl_SimulateDisplacementField.so.2.3.1.dev37-gf78b2 | | |-- libl_SmoothDisplacementField.so -> libl_SmoothDisplacementField.so.2 | | |-- libl_SmoothDisplacementField.so.2 -> libl_SmoothDisplacementField.so.2.3.1.dev37-gf78b2 | | |-- libl_SmoothDisplacementField.so.2.3.1.dev37-gf78b2 | | |-- libl_SmoothImage.so -> libl_SmoothImage.so.2 | | |-- libl_SmoothImage.so.2 -> libl_SmoothImage.so.2.3.1.dev37-gf78b2 | | |-- libl_SmoothImage.so.2.3.1.dev37-gf78b2 | | |-- libl_StackSlices.so -> libl_StackSlices.so.2 | | |-- libl_StackSlices.so.2 -> libl_StackSlices.so.2.3.1.dev37-gf78b2 | | |-- libl_StackSlices.so.2.3.1.dev37-gf78b2 | | |-- libl_SuperResolution.so -> libl_SuperResolution.so.2 | | |-- libl_SuperResolution.so.2 -> libl_SuperResolution.so.2.3.1.dev37-gf78b2 | | |-- libl_SuperResolution.so.2.3.1.dev37-gf78b2 | | |-- libl_SurfaceBasedSmoothing.so -> libl_SurfaceBasedSmoothing.so.2 | | |-- libl_SurfaceBasedSmoothing.so.2 -> libl_SurfaceBasedSmoothing.so.2.3.1.dev37-gf78b2 | | |-- libl_SurfaceBasedSmoothing.so.2.3.1.dev37-gf78b2 | | |-- libl_SurfaceCurvature.so -> libl_SurfaceCurvature.so.2 | | |-- libl_SurfaceCurvature.so.2 -> libl_SurfaceCurvature.so.2.3.1.dev37-gf78b2 | | |-- libl_SurfaceCurvature.so.2.3.1.dev37-gf78b2 | | |-- libl_TextureCooccurrenceFeatures.so -> libl_TextureCooccurrenceFeatures.so.2 | | |-- libl_TextureCooccurrenceFeatures.so.2 -> libl_TextureCooccurrenceFeatures.so.2.3.1.dev37-gf78b2 | | |-- libl_TextureCooccurrenceFeatures.so.2.3.1.dev37-gf78b2 | | |-- libl_TextureRunLengthFeatures.so -> libl_TextureRunLengthFeatures.so.2 | | |-- libl_TextureRunLengthFeatures.so.2 -> libl_TextureRunLengthFeatures.so.2.3.1.dev37-gf78b2 | | |-- libl_TextureRunLengthFeatures.so.2.3.1.dev37-gf78b2 | | |-- libl_ThresholdImage.so -> libl_ThresholdImage.so.2 | | |-- libl_ThresholdImage.so.2 -> libl_ThresholdImage.so.2.3.1.dev37-gf78b2 | | |-- libl_ThresholdImage.so.2.3.1.dev37-gf78b2 | | |-- libl_TileImages.so -> libl_TileImages.so.2 | | |-- libl_TileImages.so.2 -> libl_TileImages.so.2.3.1.dev37-gf78b2 | | |-- libl_TileImages.so.2.3.1.dev37-gf78b2 | | |-- libl_TimeSCCAN.so -> libl_TimeSCCAN.so.2 | | |-- libl_TimeSCCAN.so.2 -> libl_TimeSCCAN.so.2.3.1.dev37-gf78b2 | | |-- libl_TimeSCCAN.so.2.3.1.dev37-gf78b2 | | |-- libl_WarpImageMultiTransform.so -> libl_WarpImageMultiTransform.so.2 | | |-- libl_WarpImageMultiTransform.so.2 -> libl_WarpImageMultiTransform.so.2.3.1.dev37-gf78b2 | | |-- libl_WarpImageMultiTransform.so.2.3.1.dev37-gf78b2 | | |-- libl_WarpTensorImageMultiTransform.so -> libl_WarpTensorImageMultiTransform.so.2 | | |-- libl_WarpTensorImageMultiTransform.so.2 -> libl_WarpTensorImageMultiTransform.so.2.3.1.dev37-gf78b2 | | |-- libl_WarpTensorImageMultiTransform.so.2.3.1.dev37-gf78b2 | | |-- libl_WarpTimeSeriesImageMultiTransform.so -> libl_WarpTimeSeriesImageMultiTransform.so.2 | | |-- libl_WarpTimeSeriesImageMultiTransform.so.2 -> libl_WarpTimeSeriesImageMultiTransform.so.2.3.1.dev37-gf78b2 | | |-- libl_WarpTimeSeriesImageMultiTransform.so.2.3.1.dev37-gf78b2 | | |-- libl_antsAI.so -> libl_antsAI.so.2 | | |-- libl_antsAI.so.2 -> libl_antsAI.so.2.3.1.dev37-gf78b2 | | |-- libl_antsAI.so.2.3.1.dev37-gf78b2 | | |-- libl_antsAffineInitializer.so -> libl_antsAffineInitializer.so.2 | | |-- libl_antsAffineInitializer.so.2 -> libl_antsAffineInitializer.so.2.3.1.dev37-gf78b2 | | |-- libl_antsAffineInitializer.so.2.3.1.dev37-gf78b2 | | |-- libl_antsAlignOrigin.so -> libl_antsAlignOrigin.so.2 | | |-- libl_antsAlignOrigin.so.2 -> libl_antsAlignOrigin.so.2.3.1.dev37-gf78b2 | | |-- libl_antsAlignOrigin.so.2.3.1.dev37-gf78b2 | | |-- libl_antsApplyTransforms.so -> libl_antsApplyTransforms.so.2 | | |-- libl_antsApplyTransforms.so.2 -> libl_antsApplyTransforms.so.2.3.1.dev37-gf78b2 | | |-- libl_antsApplyTransforms.so.2.3.1.dev37-gf78b2 | | |-- libl_antsApplyTransformsToPoints.so -> libl_antsApplyTransformsToPoints.so.2 | | |-- libl_antsApplyTransformsToPoints.so.2 -> libl_antsApplyTransformsToPoints.so.2.3.1.dev37-gf78b2 | | |-- libl_antsApplyTransformsToPoints.so.2.3.1.dev37-gf78b2 | | |-- libl_antsJointFusion.so -> libl_antsJointFusion.so.2 | | |-- libl_antsJointFusion.so.2 -> libl_antsJointFusion.so.2.3.1.dev37-gf78b2 | | |-- libl_antsJointFusion.so.2.3.1.dev37-gf78b2 | | |-- libl_antsJointTensorFusion.so -> libl_antsJointTensorFusion.so.2 | | |-- libl_antsJointTensorFusion.so.2 -> libl_antsJointTensorFusion.so.2.3.1.dev37-gf78b2 | | |-- libl_antsJointTensorFusion.so.2.3.1.dev37-gf78b2 | | |-- libl_antsLandmarkBasedTransformInitializer.so -> libl_antsLandmarkBasedTransformInitializer.so.2 | | |-- libl_antsLandmarkBasedTransformInitializer.so.2 -> libl_antsLandmarkBasedTransformInitializer.so.2.3.1.dev37-gf78b2 | | |-- libl_antsLandmarkBasedTransformInitializer.so.2.3.1.dev37-gf78b2 | | |-- libl_antsMotionCorr.so -> libl_antsMotionCorr.so.2 | | |-- libl_antsMotionCorr.so.2 -> libl_antsMotionCorr.so.2.3.1.dev37-gf78b2 | | |-- libl_antsMotionCorr.so.2.3.1.dev37-gf78b2 | | |-- libl_antsMotionCorrDiffusionDirection.so -> libl_antsMotionCorrDiffusionDirection.so.2 | | |-- libl_antsMotionCorrDiffusionDirection.so.2 -> libl_antsMotionCorrDiffusionDirection.so.2.3.1.dev37-gf78b2 | | |-- libl_antsMotionCorrDiffusionDirection.so.2.3.1.dev37-gf78b2 | | |-- libl_antsMotionCorrStats.so -> libl_antsMotionCorrStats.so.2 | | |-- libl_antsMotionCorrStats.so.2 -> libl_antsMotionCorrStats.so.2.3.1.dev37-gf78b2 | | |-- libl_antsMotionCorrStats.so.2.3.1.dev37-gf78b2 | | |-- libl_antsRegistration.so -> libl_antsRegistration.so.2 | | |-- libl_antsRegistration.so.2 -> libl_antsRegistration.so.2.3.1.dev37-gf78b2 | | |-- libl_antsRegistration.so.2.3.1.dev37-gf78b2 | | |-- libl_antsSliceRegularizedRegistration.so -> libl_antsSliceRegularizedRegistration.so.2 | | |-- libl_antsSliceRegularizedRegistration.so.2 -> libl_antsSliceRegularizedRegistration.so.2.3.1.dev37-gf78b2 | | |-- libl_antsSliceRegularizedRegistration.so.2.3.1.dev37-gf78b2 | | |-- libl_antsTransformInfo.so -> libl_antsTransformInfo.so.2 | | |-- libl_antsTransformInfo.so.2 -> libl_antsTransformInfo.so.2.3.1.dev37-gf78b2 | | |-- libl_antsTransformInfo.so.2.3.1.dev37-gf78b2 | | |-- libl_antsUtilitiesTesting.so -> libl_antsUtilitiesTesting.so.2 | | |-- libl_antsUtilitiesTesting.so.2 -> libl_antsUtilitiesTesting.so.2.3.1.dev37-gf78b2 | | |-- libl_antsUtilitiesTesting.so.2.3.1.dev37-gf78b2 | | |-- libl_compareTwoTransforms.so -> libl_compareTwoTransforms.so.2 | | |-- libl_compareTwoTransforms.so.2 -> libl_compareTwoTransforms.so.2.3.1.dev37-gf78b2 | | |-- libl_compareTwoTransforms.so.2.3.1.dev37-gf78b2 | | |-- libl_iMath.so -> libl_iMath.so.2 | | |-- libl_iMath.so.2 -> libl_iMath.so.2.3.1.dev37-gf78b2 | | |-- libl_iMath.so.2.3.1.dev37-gf78b2 | | |-- libl_sccan.so -> libl_sccan.so.2 | | |-- libl_sccan.so.2 -> libl_sccan.so.2.3.1.dev37-gf78b2 | | |-- libl_sccan.so.2.3.1.dev37-gf78b2 | | |-- libl_simpleSynRegistration.so -> libl_simpleSynRegistration.so.2 | | |-- libl_simpleSynRegistration.so.2 -> libl_simpleSynRegistration.so.2.3.1.dev37-gf78b2 | | |-- libl_simpleSynRegistration.so.2.3.1.dev37-gf78b2 | | |-- sccan | | `-- simpleSynRegistration | |-- ITKFactoryRegistration | | |-- itkImageIOFactoryRegisterManager.h | | |-- itkMeshIOFactoryRegisterManager.h | | `-- itkTransformIOFactoryRegisterManager.h | |-- Makefile | |-- ProjectSourceVersionVars.cmake | `-- cmake_install.cmake |-- ANTS-prefix | |-- src | | `-- ANTS-stamp | | |-- ANTS-build | | |-- ANTS-configure | | |-- ANTS-done | | |-- ANTS-download | | |-- ANTS-install | | |-- ANTS-mkdir | | |-- ANTS-patch | | `-- ANTS-update | `-- tmp | |-- ANTS-cfgcmd.txt | `-- ANTS-cfgcmd.txt.in |-- CMakeCache.txt |-- CMakeFiles | |-- 3.15.3 | | |-- CMakeCCompiler.cmake | | |-- CMakeCXXCompiler.cmake | | |-- CMakeDetermineCompilerABI_C.bin | | |-- CMakeDetermineCompilerABI_CXX.bin | | |-- CMakeSystem.cmake | | |-- CompilerIdC | | | |-- CMakeCCompilerId.c | | | |-- a.out | | | `-- tmp | | `-- CompilerIdCXX | | |-- CMakeCXXCompilerId.cpp | | |-- a.out | | `-- tmp | |-- ANTS-complete | |-- ANTS.dir | | |-- DependInfo.cmake | | |-- Labels.json | | |-- Labels.txt | | |-- build.make | | |-- cmake_clean.cmake | | |-- depend.internal | | |-- depend.make | | `-- progress.make | |-- CMakeDirectoryInformation.cmake | |-- CMakeError.log | |-- CMakeOutput.log | |-- CMakeRuleHashes.txt | |-- CMakeTmp | |-- ITKv5-complete | |-- ITKv5.dir | | |-- DependInfo.cmake | | |-- Labels.json | | |-- Labels.txt | | |-- build.make | | |-- cmake_clean.cmake | | |-- depend.internal | | |-- depend.make | | `-- progress.make | |-- Makefile.cmake | |-- Makefile2 | |-- TargetDirectories.txt | |-- cmake.check_cache | `-- progress.marks |-- CPackConfig.cmake |-- CPackSourceConfig.cmake |-- CTestTestfile.cmake |-- EMPTY_ITKv5 |-- EMPTY_ITKv5-build |-- ITKv5-prefix | |-- src | | `-- ITKv5-stamp | | |-- ITKv5-build | | |-- ITKv5-configure | | |-- ITKv5-done | | |-- ITKv5-download | | |-- ITKv5-install | | |-- ITKv5-mkdir | | |-- ITKv5-patch | | `-- ITKv5-update | `-- tmp | |-- ITKv5-cfgcmd.txt | `-- ITKv5-cfgcmd.txt.in |-- Makefile |-- cmake_install.cmake |-- gentoo_common_config.cmake |-- gentoo_rules.cmake `-- gentoo_toolchain.cmake 253 directories, 3303 files