ERROR conda.core.link:_execute(730)

[xuanxuan-Jin]

Describe the bug
ERROR conda.core.link:_execute(730): An error occurred while installing package 'bioconda::bioconductor-genomeinfodbdata-1.2.1-r351_0'.

To Reproduce
Could not create conda environment from /lustre/grp/bitcap/jinxx/source/varCA/rules/../envs/prepare.yml:
Expected behavior
A clear and concise description of what you expected to happen.

here is my log file :
Building DAG of jobs...
Creating conda environment envs/prepare.yml...
Downloading and installing remote packages.
CreateCondaEnvironmentException:
Could not create conda environment from /lustre/grp/bitcap/jinxx/source/varCA/rules/../envs/prepare.yml:
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done
Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working... done
ERROR conda.core.link:_execute(730): An error occurred while installing package 'bioconda::bioconductor-genomeinfodbdata-1.2.1-r351_0'.
Rolling back transaction: ...working... done
class: LinkError
message:
post-link script failed for package bioconda::bioconductor-genomeinfodbdata-1.2.1-r351_0
location of failed script: /lustre/grp/bitcap/jinxx/source/varCA/.snakemake/conda/942e2afa/bin/.bioconductor-genomeinfodbdata-post-link.sh
==> script messages <==

==> script output <==
stdout: /lustre/grp/bitcap/jinxx/source/varCA/.snakemake/conda/942e2afa/share/bioconductor-genomeinfodbdata-1.2.1-0/GenomeInfoDbData_1.2.1.tar.gz: FAILED
ERROR: post-link.sh was unable to download any of the following URLs with the md5sum 2fd536521151e2ff37217b5cfee8cec4:
https://bioconductor.org/packages/3.9/data/annotation/src/contrib/GenomeInfoDbData_1.2.1.tar.gz
https://bioarchive.galaxyproject.org/GenomeInfoDbData_1.2.1.tar.gz
https://depot.galaxyproject.org/software/bioconductor-genomeinfodbdata/bioconductor-genomeinfodbdata_1.2.1_src_all.tar.gz

stderr: % Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
100 415 100 415 0 0 374 0 0:00:01 0:00:01 --:--:-- 374
md5sum: WARNING: 1 computed checksum did NOT match
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- 0:00:03 --:--:-- 0
curl: (7) Failed to connect to bioarchive.galaxyproject.org port 443: No route to host
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- 0:00:03 --:--:-- 0
curl: (7) Failed to connect to depot.galaxyproject.org port 443: No route to host

return code: 1

kwargs:
{}

Traceback (most recent call last):
File "/lustre/grp/bitcap/jinxx/miniconda3/lib/python3.9/site-packages/conda/exceptions.py", line 1082, in call
return func(*args, **kwargs)
File "/lustre/grp/bitcap/jinxx/miniconda3/lib/python3.9/site-packages/conda_env/cli/main.py", line 80, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/lustre/grp/bitcap/jinxx/miniconda3/lib/python3.9/site-packages/conda_env/cli/main_create.py", line 142, in execute
result[installer_type] = installer.install(prefix, pkg_specs, args, env)
File "/lustre/grp/bitcap/jinxx/miniconda3/lib/python3.9/site-packages/conda_env/installers/conda.py", line 59, in install
unlink_link_transaction.execute()
File "/lustre/grp/bitcap/jinxx/miniconda3/lib/python3.9/site-packages/conda/core/link.py", line 281, in execute
self._execute(tuple(concat(interleave(itervalues(self.prefix_action_groups)))))
File "/lustre/grp/bitcap/jinxx/miniconda3/lib/python3.9/site-packages/conda/core/link.py", line 744, in _execute
raise CondaMultiError(tuple(concatv(
conda.CondaMultiErrorclass: LinkError
message:
post-link script failed for package bioconda::bioconductor-genomeinfodbdata-1.2.1-r351_0
location of failed script: /lustre/grp/bitcap/jinxx/source/varCA/.snakemake/conda/942e2afa/bin/.bioconductor-genomeinfodbdata-post-link.sh
==> script messages <==

==> script output <==
stdout: /lustre/grp/bitcap/jinxx/source/varCA/.snakemake/conda/942e2afa/share/bioconductor-genomeinfodbdata-1.2.1-0/GenomeInfoDbData_1.2.1.tar.gz: FAILED
ERROR: post-link.sh was unable to download any of the following URLs with the md5sum 2fd536521151e2ff37217b5cfee8cec4:
https://bioconductor.org/packages/3.9/data/annotation/src/contrib/GenomeInfoDbData_1.2.1.tar.gz
https://bioarchive.galaxyproject.org/GenomeInfoDbData_1.2.1.tar.gz
https://depot.galaxyproject.org/software/bioconductor-genomeinfodbdata/bioconductor-genomeinfodbdata_1.2.1_src_all.tar.gz

stderr: % Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
100 415 100 415 0 0 374 0 0:00:01 0:00:01 --:--:-- 374
md5sum: WARNING: 1 computed checksum did NOT match
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- 0:00:03 --:--:-- 0
curl: (7) Failed to connect to bioarchive.galaxyproject.org port 443: No route to host
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- 0:00:03 --:--:-- 0
curl: (7) Failed to connect to depot.galaxyproject.org port 443: No route to host

return code: 1

kwargs:
{}

: <exception str() failed>

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
File "/lustre/grp/bitcap/jinxx/miniconda3/bin/conda-env", line 7, in
sys.exit(main())
File "/lustre/grp/bitcap/jinxx/miniconda3/lib/python3.9/site-packages/conda_env/cli/main.py", line 91, in main
return conda_exception_handler(do_call, args, parser)
File "/lustre/grp/bitcap/jinxx/miniconda3/lib/python3.9/site-packages/conda/exceptions.py", line 1374, in conda_exception_handler
return_value = exception_handler(func, *args, **kwargs)
File "/lustre/grp/bitcap/jinxx/miniconda3/lib/python3.9/site-packages/conda/exceptions.py", line 1085, in call
return self.handle_exception(exc_val, exc_tb)
File "/lustre/grp/bitcap/jinxx/miniconda3/lib/python3.9/site-packages/conda/exceptions.py", line 1116, in handle_exception
return self.handle_application_exception(exc_val, exc_tb)
File "/lustre/grp/bitcap/jinxx/miniconda3/lib/python3.9/site-packages/conda/exceptions.py", line 1132, in handle_application_exception
self._print_conda_exception(exc_val, exc_tb)
File "/lustre/grp/bitcap/jinxx/miniconda3/lib/python3.9/site-packages/conda/exceptions.py", line 1136, in _print_conda_exception
print_conda_exception(exc_val, exc_tb)
File "/lustre/grp/bitcap/jinxx/miniconda3/lib/python3.9/site-packages/conda/exceptions.py", line 1059, in print_conda_exception
stderrlog.error("\n%r\n", exc_val)
File "/lustre/grp/bitcap/jinxx/miniconda3/lib/python3.9/logging/init.py", line 1475, in error
self._log(ERROR, msg, args, **kwargs)
File "/lustre/grp/bitcap/jinxx/miniconda3/lib/python3.9/logging/init.py", line 1589, in _log
self.handle(record)
File "/lustre/grp/bitcap/jinxx/miniconda3/lib/python3.9/logging/init.py", line 1598, in handle
if (not self.disabled) and self.filter(record):
File "/lustre/grp/bitcap/jinxx/miniconda3/lib/python3.9/logging/init.py", line 806, in filter
result = f.filter(record)
File "/lustre/grp/bitcap/jinxx/miniconda3/lib/python3.9/site-packages/conda/gateways/logging.py", line 61, in filter
record.msg = record.msg % new_args
File "/lustre/grp/bitcap/jinxx/miniconda3/lib/python3.9/site-packages/conda/init.py", line 132, in repr
errs.append(e.repr())
File "/lustre/grp/bitcap/jinxx/miniconda3/lib/python3.9/site-packages/conda/init.py", line 71, in repr
return '%s: %s' % (self.class.name, text_type(self))
File "/lustre/grp/bitcap/jinxx/miniconda3/lib/python3.9/site-packages/conda/init.py", line 90, in str
return text_type(self.message % self._kwargs)
ValueError: unsupported format character 'T' (0x54) at index 852

File "/lustre/grp/bitcap/jinxx/miniconda3/envs/snakemake/lib/python3.10/site-packages/snakemake/deployment/conda.py", line 333, in create