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pyproject_old.toml
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pyproject_old.toml
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[project]
name = "TransfoRNA"
version = "0.0.1"
description = "TransfoRNA: Navigating the Uncertainties of Small RNA Annotation with an Adaptive Machine Learning Strategy"
readme = "README.md"
requires-python = ">=3.9"
authors = [{ name = "Yasser Taha", email = "ytaha@hb-dx.com" },{ name = "Julia Jehn", email = "jjehn@hb-dx.com"}]
dependencies = [
"anndata==0.8.0",
"dill==0.3.6",
"hydra-core==1.3.0",
"imbalanced-learn==0.9.1",
"matplotlib==3.5.3",
"numpy==1.22.3",
"omegaconf==2.2.2",
"pandas==1.5.2",
"plotly==5.10.0",
"PyYAML==6.0",
"rich==12.6.0",
"viennarna>=2.5.0a5",
"scanpy==1.9.1",
"scikit_learn==1.2.0",
"skorch==0.12.1",
"torch==1.10.1",
"tensorboard==2.16.2",
"Levenshtein==0.21.0",
"huggingface_hub==0.23.3",
"transformers==4.41.2",
"setuptools==59.5.0"
]
[project.urls]
"Homepage" = "https://github.com/gitHBDX/TransfoRNA"
[tool.setuptools.package-data]
transforna = ["*.yaml"]
[tool.setuptools.packages.find]
where = ["transforna"]
include = ["*"]
[project.scripts]
"transforna" = "transforna.__main__:main"