Supporting material for MMG 801 Lectures 3–5 on 'Phylogeny and Comparative Genomics'
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Updated
May 25, 2022
Supporting material for MMG 801 Lectures 3–5 on 'Phylogeny and Comparative Genomics'
Implementation of "Basic Local Alignment Search Tool" in Hadoop for DNA analysis
Repo for course 4 bioinformatics
Bioinformatics Data Structures & Algorithms [such as the Q-Gram Index, scoring alignments , rna-structure prediction, generating the BLAST-Ńeighborhood and more.]
The official Seqs-Extractor Repository
Retrieves matrix with number of gene/protein hits per query in the blast result. Takes blast tabular file as input.
An improved method for predicting binders of HLA-DRB1-04:01
Sequence similarity searches (e.g. BLAST) made easy
Tool for analysing BLAST output for ncRNA sequences
A PHP wrapper for NCBI BLAST URL API
genomic alignment similarity search tool
Seamless Integration of BLAST Sequence Searches in R
Microsoft Azure HPC & Big Compute
MView extracts and reformats the results of a sequence database search or multiple alignment.
Interface for the Basic Local Alignment Search Tool (BLAST) - R-Package
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