Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.
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Updated
May 22, 2024 - Nextflow
Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.
Online Megasquirt/Tuner Studio MSQ file viewer
Metfrag for Galaxy
List of all available extensions for our cross-linking search engine MS Annika.
Extensions to use the cross-linking tool Scout with other software.
Generate a spectral library for Spectronaut from MS Annika results.
MS Annika is a crosslink search engine based on MS Amanda, aimed at identifying crosslinks of MS2-cleavable crosslinkers from MS2 and MS3 spectra.
Export MS Annika crosslink results to different formats.
Extensions for better usability of the cross-linking tool MaXLinker.
Calculates Intensities of Cross-linked Peptides from MS Annika CSMs.
MS Amanda is a scoring system to identify peptides out of tandem mass spectrometry data using a database of known proteins.
Adds retention time to dtaselect output files, by reading it from ms2 (either in the local system or in a remote server)
Add a description, image, and links to the ms2 topic page so that developers can more easily learn about it.
To associate your repository with the ms2 topic, visit your repo's landing page and select "manage topics."