ncbi-geo
Here are 12 public repositories matching this topic...
Subclassification of disease states based on the intersection of literature and expression
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Jan 15, 2019 - Python
Microarray Analysis Pipeline in Python
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Aug 1, 2019 - Jupyter Notebook
Scripts using GEOquery package to fetch expression matrices and phenotypic data associated with GSE datasets
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Nov 18, 2019 - R
A small utility to quickly tag studies and samples from the NCBI Gene Expression Omnibus (GEO) with a curses interface.
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Jun 15, 2020 - Python
A list of publicly available Microarray Gene Expression datasets with proper attribution and associated toolkits.
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Jul 28, 2020 - Python
analyze_geo_microarrays.py : Differential expression analysis of published microarrays datasets from the NCBI Gene Expression Omnibus (GEO)
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Aug 1, 2021 - Python
My solutions for the project of "An Intro to Bioinformatics" - Sharif University of Technology (SUT) - Prof. Somayyeh Koohi and Prof. Ali Sharifi-Zarchi - Fall 2021(1400-1).
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Jul 6, 2023 - R
This repository contains a Jupyter Notebook for the analysis of Non-Small Cell Lung Cancer (NSCLC) data using various machine learning techniques.
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Jun 24, 2024 - Jupyter Notebook
Bioinformatic analysis of gene expression microarray profiles and DGEs on R and R studio
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Jul 17, 2024 - Jupyter Notebook
The bridge between the NCBI Gene Expression Omnibus and Bioconductor
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Aug 6, 2024 - R
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