A port of biocommons/hgvs to the Rust programming language
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Updated
Oct 4, 2024 - Rust
A port of biocommons/hgvs to the Rust programming language
Versatile Interface for Genetics Utilization of Nice Ontologies
VEP-like tool for sequence ontology and HGVS annotation of VCF files
Annotation of VCF variants with functional impact and from databases (executable+library)
Genome annotation based on Rust and RocksDB
Rust-based background worker for varfish-server
VarFish: comprehensive DNA variant analysis for diagnostics and research
BSA-QTL Mapping in Drosophila Ananassae
(Next-generation; in-development) VarFish Docker Compose
Re-implementation of the CADA phenotype-based prioritization algorithm
VarFish software development documentation
A collection of software to work with genomic variants
Download public databases for VarFish
Clinvar data builds for annonars
A WDL-based workflow for extraction of variants and their associated info from large VCF files
A port of biocommons/seqrepo to the Rust programming language
Script and Docker container for VarFish installation and data download
VarFish REST API client (CLI + Python package)
Automated evaluation of ACMG rules
Utilities for using RocksDB as read-only lookup table (after initial bulk import)
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