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feat: migrate mesh-io to its own package
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| Original file line number | Diff line number | Diff line change |
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@@ -58,4 +58,4 @@ | |
| "type": "git", | ||
| "url": "https://github.com/InsightSoftwareConsortium/itk-wasm" | ||
| } | ||
| } | ||
| } | ||
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,4 +1,3 @@ | ||
| ImageIOIndex.ts.in | ||
| dist | ||
| emscripten-build/ | ||
| wasi-build/ | ||
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|
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,6 @@ | ||
| dist | ||
| emscripten-build/ | ||
| wasi-build/ | ||
| package-lock.json | ||
| test/data/ | ||
| test/data.tar.gz |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,25 @@ | ||
| include(FetchContent) | ||
| option(ZSTD_BUILD_CONTRIB "BUILD_CONTRIB" OFF) | ||
| option(ZSTD_BUILD_PROGRAMS "BUILD_PROGRAMS" OFF) | ||
| option(ZSTD_BUILD_SHARED "BUILD_SHARED" OFF) | ||
| option(ZSTD_BUILD_STATIC "BUILD_STATIC" ON) | ||
| option(ZSTD_BUILD_TESTS "BUILD_TESTS" OFF) | ||
| option(ZSTD_BUILD_LEGACY_SUPPORT "BUILD_LEGACY_SUPPORT" OFF) | ||
| option(ZSTD_MULTITHREAD_SUPPORT "BUILD_MULTITHREAD_SUPPORT" OFF) | ||
| option(ZSTD_BUILD_PROGRAMS_LINK_SHARED "BUILD_PROGRAMS_LINK_SHARED" OFF) | ||
| option(ZSTD_BUILD_LZ4 "BUILD_LZ4" OFF) | ||
| option(ZSTD_BUILD_LZMA "BUILD_LZMA" OFF) | ||
| option(ZSTD_BUILD_ZLIB "BUILD_ZLIB" OFF) | ||
| set(zstd_GIT_REPOSITORY "https://github.com/facebook/zstd.git") | ||
| # v1.5.5 | ||
| set(zstd_GIT_TAG 17ecb1e2df45a45be908b34aba34955199bf11b4) | ||
| FetchContent_Declare( | ||
| zstd_lib | ||
| GIT_REPOSITORY ${zstd_GIT_REPOSITORY} | ||
| GIT_TAG ${zstd_GIT_TAG} | ||
| ) | ||
|
|
||
| FetchContent_MakeAvailable(zstd_lib) | ||
| set(zstd_lib_INCLUDE_DIR "${zstd_lib_SOURCE_DIR}/lib") | ||
| include_directories(${zstd_lib_INCLUDE_DIR}) | ||
| add_subdirectory("${zstd_lib_SOURCE_DIR}/build/cmake" "${zstd_lib_BINARY_DIR}") |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,131 @@ | ||
| cmake_minimum_required(VERSION 3.16) | ||
| project(itkwasm-mesh-io) | ||
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|
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| set(CMAKE_CXX_STANDARD 17) | ||
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| if (NOT TARGET libzstd_static) | ||
| include(${CMAKE_CURRENT_SOURCE_DIR}/BuildZstd.cmake) | ||
| endif() | ||
|
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| # This list should be ordered from approximately most commonly to least | ||
| # commonly used modules. | ||
| set(WebAssemblyInterface_MeshIOModules | ||
| "ITKIOMeshBYU" | ||
| "ITKIOMeshFreeSurfer" | ||
| "ITKIOMeshOBJ" | ||
| "ITKIOMeshOFF" | ||
| "IOMeshSTL" | ||
| "IOMeshSWC" | ||
| "ITKIOMeshVTK" | ||
| CACHE STRING | ||
| "String delimited list of ITK mesh IO modules to support.") | ||
|
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| set(meshios_ITKIOMeshBYU itkBYUMeshIO) | ||
| set(meshio_id_itkBYUMeshIO 0) | ||
| set(meshio_kebab_itkBYUMeshIO "byu") | ||
|
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| set(meshios_ITKIOMeshFreeSurfer itkFreeSurferAsciiMeshIO itkFreeSurferBinaryMeshIO) | ||
| set(meshio_id_itkFreeSurferAsciiMeshIO 1) | ||
| set(meshio_kebab_itkFreeSurferAsciiMeshIO "free-surfer-ascii") | ||
| set(meshio_id_itkFreeSurferBinaryMeshIO 2) | ||
| set(meshio_kebab_itkFreeSurferBinaryMeshIO "free-surfer-binary") | ||
|
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||
| set(meshios_ITKIOMeshVTK itkVTKPolyDataMeshIO) | ||
| set(meshio_id_itkVTKPolyDataMeshIO 3) | ||
| set(meshio_kebab_itkVTKPolyDataMeshIO "vtk-poly-data") | ||
|
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||
| set(meshios_ITKIOMeshOBJ itkOBJMeshIO) | ||
| set(meshio_id_itkOBJMeshIO 4) | ||
| set(meshio_kebab_itkOBJMeshIO "obj") | ||
|
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||
| set(meshios_ITKIOMeshOFF itkOFFMeshIO) | ||
| set(meshio_id_itkOFFMeshIO 5) | ||
| set(meshio_kebab_itkOFFMeshIO "off") | ||
|
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||
| set(meshios_IOMeshSTL itkSTLMeshIO) | ||
| set(meshio_id_itkSTLMeshIO 6) | ||
| set(meshio_kebab_itkSTLMeshIO "stl") | ||
|
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||
| set(meshios_IOMeshSWC itkSWCMeshIO) | ||
| set(meshio_id_itkSWCMeshIO 7) | ||
| set(meshio_kebab_itkSWCMeshIO "swc") | ||
|
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||
| set(meshios_WebAssemblyInterface itkWasmMeshIO itkWasmZstdMeshIO) | ||
| set(meshio_id_itkWasmMeshIO 8) | ||
| set(meshio_kebab_itkWasmMeshIO "wasm") | ||
| set(meshio_id_itkWasmZstdMeshIO 9) | ||
| set(meshio_kebab_itkWasmZstdMeshIO "wasm-ztd") | ||
|
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||
| set(ITK_NO_MESHIO_FACTORY_REGISTER_MANAGER 1) | ||
| set(MeshIOIndex_ARRAY "") | ||
| foreach(io_module ${WebAssemblyInterface_MeshIOModules} WebAssemblyInterface) | ||
| if (DEFINED WebAssemblyInterface_INCLUDE_DIRS) | ||
| if(${io_module} STREQUAL "WebAssemblyInterface") | ||
| find_package(ITK REQUIRED COMPONENTS ITKIOMeshBase) | ||
| include(${ITK_USE_FILE}) | ||
| include_directories(${WebAssemblyInterface_INCLUDE_DIRS}) | ||
| include_directories(${CMAKE_CURRENT_SOURCE_DIR}) | ||
| list(APPEND ITK_LIBRARIES ${WebAssemblyInterface_LIBRARIES}) | ||
| else() | ||
| find_package(ITK REQUIRED COMPONENTS ${io_module} WebAssemblyInterface) | ||
| include(${ITK_USE_FILE}) | ||
| endif() | ||
| else() | ||
| find_package(ITK REQUIRED COMPONENTS ${io_module} WebAssemblyInterface) | ||
| include(${ITK_USE_FILE}) | ||
| endif() | ||
|
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||
| if(NOT DEFINED meshios_${io_module}) | ||
| message(FATAL_ERROR "Unknown MeshIOBase classes for module ${io_module}") | ||
| endif() | ||
| foreach(meshio ${meshios_${io_module}}) | ||
| string(SUBSTRING "${meshio}" 3 -1 ioname) | ||
| if(NOT DEFINED meshio_kebab_${meshio}) | ||
| message(FATAL_ERROR "Unknown kebab name for meshio ${meshio}") | ||
| endif() | ||
| set(ioname ${meshio_kebab_${meshio}}) | ||
| set(read_binary "${ioname}-read-mesh") | ||
| set(write_binary "${ioname}-write-mesh") | ||
| set(MeshIOIndex_ARRAY "${MeshIOIndex_ARRAY}'${ioname}', ") | ||
| set(extra_srcs) | ||
| if(${meshio} STREQUAL "itkWasmZstdMeshIO") | ||
| list(APPEND ITK_LIBRARIES libzstd_static) | ||
| list(APPEND extra_srcs itkWasmZstdMeshIO.cxx) | ||
| endif() | ||
|
|
||
| add_executable(${read_binary} read-mesh.cxx ${extra_srcs}) | ||
| target_link_libraries(${read_binary} PUBLIC ${ITK_LIBRARIES}) | ||
| target_compile_definitions(${read_binary} PUBLIC -DMESH_IO_CLASS=${meshio_id_${meshio}} -DMESH_IO_KEBAB_NAME=${ioname}) | ||
| add_executable(${write_binary} write-mesh.cxx ${extra_srcs}) | ||
| target_link_libraries(${write_binary} PUBLIC ${ITK_LIBRARIES}) | ||
| target_compile_definitions(${write_binary} PUBLIC -DMESH_IO_CLASS=${meshio_id_${meshio}} -DMESH_IO_KEBAB_NAME=${ioname}) | ||
| if (EMSCRIPTEN) | ||
| set(target_esm_read "${read_binary}") | ||
| set(target_esm_write "${write_binary}") | ||
| foreach(target ${target_esm_read} ${target_esm_write}) | ||
| set(exception_catching ) | ||
| set(meshio_common_link_flags " -s ERROR_ON_UNDEFINED_SYMBOLS=0 -s SUPPORT_LONGJMP=1") | ||
| get_property(link_flags TARGET ${target} PROPERTY LINK_FLAGS) | ||
| set_property(TARGET ${target} APPEND_STRING PROPERTY LINK_FLAGS " ${meshio_common_link_flags} ${link_flags}") | ||
| endforeach() | ||
| endif() | ||
| endforeach() | ||
| endforeach() | ||
|
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| enable_testing() | ||
|
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| set(input_dir ${CMAKE_CURRENT_SOURCE_DIR}/test/data/input) | ||
| set(baseline_dir ${CMAKE_CURRENT_SOURCE_DIR}/test/data/baseline) | ||
| set(output_dir ${CMAKE_CURRENT_BINARY_DIR}) | ||
|
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| add_test(NAME byu-read-mesh-test | ||
| COMMAND byu-read-mesh | ||
| ${input_dir}/cube.byu | ||
| ${output_dir}/byu-read-mesh-test.could-read.json | ||
| ${output_dir}/byu-read-mesh-test.iwm.cbor) | ||
|
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||
| add_test(NAME byu-write-mesh-test | ||
| COMMAND byu-write-mesh | ||
| ${baseline_dir}/byu-read-mesh-test.iwm.cbor | ||
| ${output_dir}/byu-write-mesh-test.could-write.json | ||
| ${output_dir}/byu-write-mesh-test.byu) |
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