Sen2Cube.at - Commandline interface

Commandline interface for Sen2Cube.at backend.

🔧 Installation

🐍 Local Python environment

Install latest commit from main in your current Python environment run

pip install git+https://github.com/ZGIS/sen2cli.git@main

You can also specify a version instead of @main e.g.

pip install git+https://github.com/ZGIS/sen2cli.git@v0.2.0

🐳 Docker

Download Dockerfile from GitHub. To build the image for the latest release version run

docker build -t sen2cli .

You can specify a version / tag / commit ref via build args. E.g

docker build --build-arg SEN2CLI_VERSION='main' -t sen2cli .

To run the image and mount ./host_data into /home/sen2cli/host_data run

Linux / MacOS

docker run -it --rm --name sen2cli \
  -v "$(pwd)/host_data:/home/sen2cli/host_data" \
  sen2cli /bin/bash

Windows Powershell

docker run -it --rm --name sen2cli `
  -v "${pwd}/host_data:/home/sen2cli/host_data" `
  sen2cli /bin/bash

After you are done, you might want to remove the container.

docker rm sen2cli

Run dev version in docker

Build image as described above. Then run

Windows Powershell

docker run -it --rm --name sen2cli `
  -v "${pwd}:/home/sen2cli" `
  sen2cli:dev /bin/bash

Once in the container install the package editable

pip install -e .
export PATH=$HOME/.local/bin:$PATH

🔰 Basic Usage

All commands and parameters as documented in the help screen.

$ sen2cli --help

Usage: sen2cli [OPTIONS] COMMAND [ARGS]...

Options:
  --log_file FILE  Write log to this file instead of StdErr.
  -v, --verbose    Verbose log output. Can be added up to three times for even
                   more verbosity (WARNING, INFO, DEBUG).  [x>=0]
  --help           Show this message and exit.

Commands:
  inference  Display / create / modify inferences
  session    Session related commands like 'login'
  version    Prints program version

$ sen2cli inference --help
Usage: sen2cli inference [OPTIONS] COMMAND [ARGS]...

  Display / create / modify inferences

Options:
  --tokenfile FILE                File that stores the token.  [env var:
                                  S2C_TOKENFILE]
  -f, --output_format [csv|csv_no_hdr|json]
                                  Specify output format (CSV, CSV without
                                  header, JSON)
  --help                          Show this message and exit.

Commands:
  abort   Abort running / scheduled inferences
  create  Create and schedule inference
  delete  Delete inferences.
  ls      List inferences
  rerun   Rerun finished / stopped / failed inferences

Start session / login

First you need to start a session.

$ sen2cli session login
Username: steffen.reichel
Password: 

Trying to authenticate against https://auth.sen2cube.at/realms/sen2cube-at/protocol/openid-connect/token with client iq-web-client
Login successful. Session expires at 1970-01-01 00:05:00.000000

(sen2cli) MBP:sen2cli steffen$ sen2cli session info
Logged in as:  steffen.reichel
Expires at:    1970-01-01 00:05:00.000000
Refresh until: 1970-01-01 00:30:00.000000

You can manually refresh the session

$ sen2cli session refresh
Refresh successful. Session expires at 1970-01-01 00:15:00.000000

$ sen2cli session info
Logged in as:  steffen.reichel
Expires at:    1970-01-01 00:15:00.000000
Refresh until: 1970-01-01 00:40:00.000000

NOTE To login in a script you can specify the environment variables S2C_USERNAME and S2C_PASSWORD.

NOTE For convenience the session will automatically be refreshed by commands like inference ls.

Working with inferences

The output of the inference defaults to CSV. All log messages are written to STD_ERR.

Schedule an inference

$ sen2cli inference create 218 1 2020-03-01 2020-08-01 ./host_data/geodata/id_50101.geojson --description="Scheduled for documentation"
id;factbase_id;favourite;knowledgebase_id;owner;qgis_project_location;output;status;status_message;status_progress;status_timestamp;temp_range_end;temp_range_start;timestamp_created;timestamp_finished;timestamp_started
8341;1;False;218;steffen.reichel;;[];CREATED;Inference sucessfully created;;;2020-08-01T23:59:59.999000+00:00;2020-03-01T00:00:00+00:00;2021-07-25T20:42:55.796924+00:00;;

List inferences without filter

$ sen2cli inference ls
id;factbase_id;favourite;knowledgebase_id;owner;qgis_project_location;output;status;status_message;status_progress;status_timestamp;temp_range_end;temp_range_start;timestamp_created;timestamp_finished;timestamp_started
8343;1;False;218;steffen.reichel;;[];STARTED;The inference was accepted by the inference engine;;;2020-08-01T23:59:59.999000+00:00;2020-03-01T00:00:00+00:00;2021-07-25T20:46:20.449208+00:00;;2021-07-25T20:46:19.984137+00:00
8342;1;False;218;steffen.reichel;;[];STARTED;The inference was accepted by the inference engine;;;2020-08-01T23:59:59.999000+00:00;2020-03-01T00:00:00+00:00;2021-07-25T20:46:11.031368+00:00;;2021-07-25T20:46:10.288988+00:00
8341;1;False;218;steffen.reichel;/output/sen2cube/steffen.reichel/qgis-project-id8341.zip;"[{""name"": ""Cloud_free_composite"", ""inference_id"": 8341, ""value_type"": ""numerical"", ""value_range"": [356.0, 5215.5], ""dims"": [""band"", ""y"", ""x""], ""file_type"": ""geotiff"", ""vis_type"": ""composite"", ""data"": ""/output/sen2cube/steffen.reichel/Cloud_free_composite_id8341_4326.tiff"", ""bytes"": 5400877, ""band_value_ranges"": [[356.0, 5215.5], [572.5, 3839.0], [802.0, 4391.0]]}]";SUCCEEDED;The inference was successfully processed;;;2020-08-01T23:59:59.999000+00:00;2020-03-01T00:00:00+00:00;2021-07-25T20:42:55.796924+00:00;2021-07-25T20:46:02.843996+00:00;2021-07-25T20:42:54.826214+00:00

Get inferences with filter

$ sen2cli inference ls --id=8343
id;factbase_id;favourite;knowledgebase_id;owner;qgis_project_location;output;status;status_message;status_progress;status_timestamp;temp_range_end;temp_range_start;timestamp_created;timestamp_finished;timestamp_started
8343;1;False;218;steffen.reichel;/output/sen2cube/steffen.reichel/qgis-project-id8343.zip;"[{""name"": ""Cloud_free_composite"", ""inference_id"": 8343, ""value_type"": ""numerical"", ""value_range"": [330.0, 2611.0], ""dims"": [""band"", ""y"", ""x""], ""file_type"": ""geotiff"", ""vis_type"": ""composite"", ""data"": ""/output/sen2cube/steffen.reichel/Cloud_free_composite_id8343_4326.tiff"", ""bytes"": 2037934, ""band_value_ranges"": [[330.0, 2296.0], [547.0, 2240.0], [768.0, 2611.0]]}]";SUCCEEDED;The inference was successfully processed;;;2020-08-01T23:59:59.999000+00:00;2020-03-01T00:00:00+00:00;2021-07-25T20:46:20.449208+00:00;2021-07-25T20:47:22.156676+00:00;2021-07-25T20:46:19.984137+00:00

$ sen2cli inference ls --id=8343 --id=8341
id;factbase_id;favourite;knowledgebase_id;owner;qgis_project_location;output;status;status_message;status_progress;status_timestamp;temp_range_end;temp_range_start;timestamp_created;timestamp_finished;timestamp_started
8343;1;False;218;steffen.reichel;/output/sen2cube/steffen.reichel/qgis-project-id8343.zip;"[{""name"": ""Cloud_free_composite"", ""inference_id"": 8343, ""value_type"": ""numerical"", ""value_range"": [330.0, 2611.0], ""dims"": [""band"", ""y"", ""x""], ""file_type"": ""geotiff"", ""vis_type"": ""composite"", ""data"": ""/output/sen2cube/steffen.reichel/Cloud_free_composite_id8343_4326.tiff"", ""bytes"": 2037934, ""band_value_ranges"": [[330.0, 2296.0], [547.0, 2240.0], [768.0, 2611.0]]}]";SUCCEEDED;The inference was successfully processed;;;2020-08-01T23:59:59.999000+00:00;2020-03-01T00:00:00+00:00;2021-07-25T20:46:20.449208+00:00;2021-07-25T20:47:22.156676+00:00;2021-07-25T20:46:19.984137+00:00
8341;1;False;218;steffen.reichel;/output/sen2cube/steffen.reichel/qgis-project-id8341.zip;"[{""name"": ""Cloud_free_composite"", ""inference_id"": 8341, ""value_type"": ""numerical"", ""value_range"": [356.0, 5215.5], ""dims"": [""band"", ""y"", ""x""], ""file_type"": ""geotiff"", ""vis_type"": ""composite"", ""data"": ""/output/sen2cube/steffen.reichel/Cloud_free_composite_id8341_4326.tiff"", ""bytes"": 5400877, ""band_value_ranges"": [[356.0, 5215.5], [572.5, 3839.0], [802.0, 4391.0]]}]";SUCCEEDED;The inference was successfully processed;;;2020-08-01T23:59:59.999000+00:00;2020-03-01T00:00:00+00:00;2021-07-25T20:42:55.796924+00:00;2021-07-25T20:46:02.843996+00:00;2021-07-25T20:42:54.826214+00:00

Valid filters are: --id, --knowledgebase_id, --factbase_id, --status. All filters can be added multiple times. Filter with the same name are combined with OR. Different filters with AND. So

sen2cli inference ls --status=FAILED --knowledgebase_id=218 --knowledgebase_id=221

will result in a filter

(status in ['FAILED']) AND (knowledgebase_id in [218,221])

Sorting inference ls with the --sort option.

$ sen2cli inference ls --id=8357 --id=8356 --id=8355 --id=8354 --id=8353 --sort=status
id;factbase_id;favourite;knowledgebase_id;owner;qgis_project_location;output;status;status_message;status_progress;status_timestamp;temp_range_end;temp_range_start;timestamp_created;timestamp_finished;timestamp_started
8354;1;False;218;steffen.reichel;;[];FAILED;"The inference failed: Evaluation failed at 'data' because of ""OperationalError('(psycopg2.OperationalError) FATAL:  remaining connection slots are reserved for non-replication superuser connections\\n')""";;;2020-08-01T23:59:59.999000+00:00;2020-03-01T00:00:00+00:00;2021-07-25T21:11:42.475198+00:00;2021-07-25T21:16:54.250457+00:00;2021-07-25T21:15:31.810449+00:00
8357;1;False;218;steffen.reichel;;[];FAILED;"The inference failed: Evaluation failed at 'data' because of ""OperationalError('(psycopg2.OperationalError) FATAL:  remaining connection slots are reserved for non-replication superuser connections\\n')""";;;2020-08-01T23:59:59.999000+00:00;2020-03-01T00:00:00+00:00;2021-07-25T21:11:47.710966+00:00;2021-07-25T21:17:00.174409+00:00;2021-07-25T21:16:58.742892+00:00
8355;1;False;218;steffen.reichel;;[];FAILED;"The inference failed: Evaluation failed at 'data' because of ""OperationalError('(psycopg2.OperationalError) FATAL:  remaining connection slots are reserved for non-replication superuser connections\\n')""";;;2020-08-01T23:59:59.999000+00:00;2020-03-01T00:00:00+00:00;2021-07-25T21:11:44.445165+00:00;2021-07-25T21:17:02.535571+00:00;2021-07-25T21:15:32.080859+00:00
8353;1;False;218;steffen.reichel;/output/sen2cube/steffen.reichel/qgis-project-id8353.zip;"[{""name"": ""Cloud_free_composite"", ""inference_id"": 8353, ""value_type"": ""numerical"", ""value_range"": [383.0, 7426.5], ""dims"": [""band"", ""y"", ""x""], ""file_type"": ""geotiff"", ""vis_type"": ""composite"", ""data"": ""/output/sen2cube/steffen.reichel/Cloud_free_composite_id8353_4326.tiff"", ""bytes"": 9156158, ""band_value_ranges"": [[383.0, 7426.5], [621.0, 6010.0], [865.5, 5697.0]]}]";SUCCEEDED;The inference was successfully processed;;;2020-08-01T23:59:59.999000+00:00;2020-03-01T00:00:00+00:00;2021-07-25T21:11:41.393191+00:00;2021-07-25T21:21:07.064940+00:00;2021-07-25T21:16:45.956145+00:00
8356;1;False;218;steffen.reichel;/output/sen2cube/steffen.reichel/qgis-project-id8356.zip;"[{""name"": ""Cloud_free_composite"", ""inference_id"": 8356, ""value_type"": ""numerical"", ""value_range"": [536.0, 2522.0], ""dims"": [""band"", ""y"", ""x""], ""file_type"": ""geotiff"", ""vis_type"": ""composite"", ""data"": ""/output/sen2cube/steffen.reichel/Cloud_free_composite_id8356_4326.tiff"", ""bytes"": 87112, ""band_value_ranges"": [[536.0, 2399.5], [777.0, 2336.5], [954.0, 2522.0]]}]";SUCCEEDED;The inference was successfully processed;;;2020-08-01T23:59:59.999000+00:00;2020-03-01T00:00:00+00:00;2021-07-25T21:11:46.428738+00:00;2021-07-25T21:17:23.391463+00:00;2021-07-25T21:15:32.401723+00:00

The --sort option can be a list of columns. Descending sort order by adding a - in front of the column name.

$ sen2cli inference ls --id=8357 --id=8356 --id=8355 --id=8354 --id=8353 --sort=status,-id
id;factbase_id;favourite;knowledgebase_id;owner;qgis_project_location;output;status;status_message;status_progress;status_timestamp;temp_range_end;temp_range_start;timestamp_created;timestamp_finished;timestamp_started
8357;1;False;218;steffen.reichel;;[];FAILED;"The inference failed: Evaluation failed at 'data' because of ""OperationalError('(psycopg2.OperationalError) FATAL:  remaining connection slots are reserved for non-replication superuser connections\\n')""";;;2020-08-01T23:59:59.999000+00:00;2020-03-01T00:00:00+00:00;2021-07-25T21:11:47.710966+00:00;2021-07-25T21:17:00.174409+00:00;2021-07-25T21:16:58.742892+00:00
8355;1;False;218;steffen.reichel;;[];FAILED;"The inference failed: Evaluation failed at 'data' because of ""OperationalError('(psycopg2.OperationalError) FATAL:  remaining connection slots are reserved for non-replication superuser connections\\n')""";;;2020-08-01T23:59:59.999000+00:00;2020-03-01T00:00:00+00:00;2021-07-25T21:11:44.445165+00:00;2021-07-25T21:17:02.535571+00:00;2021-07-25T21:15:32.080859+00:00
8354;1;False;218;steffen.reichel;;[];FAILED;"The inference failed: Evaluation failed at 'data' because of ""OperationalError('(psycopg2.OperationalError) FATAL:  remaining connection slots are reserved for non-replication superuser connections\\n')""";;;2020-08-01T23:59:59.999000+00:00;2020-03-01T00:00:00+00:00;2021-07-25T21:11:42.475198+00:00;2021-07-25T21:16:54.250457+00:00;2021-07-25T21:15:31.810449+00:00
8356;1;False;218;steffen.reichel;/output/sen2cube/steffen.reichel/qgis-project-id8356.zip;"[{""name"": ""Cloud_free_composite"", ""inference_id"": 8356, ""value_type"": ""numerical"", ""value_range"": [536.0, 2522.0], ""dims"": [""band"", ""y"", ""x""], ""file_type"": ""geotiff"", ""vis_type"": ""composite"", ""data"": ""/output/sen2cube/steffen.reichel/Cloud_free_composite_id8356_4326.tiff"", ""bytes"": 87112, ""band_value_ranges"": [[536.0, 2399.5], [777.0, 2336.5], [954.0, 2522.0]]}]";SUCCEEDED;The inference was successfully processed;;;2020-08-01T23:59:59.999000+00:00;2020-03-01T00:00:00+00:00;2021-07-25T21:11:46.428738+00:00;2021-07-25T21:17:23.391463+00:00;2021-07-25T21:15:32.401723+00:00
8353;1;False;218;steffen.reichel;/output/sen2cube/steffen.reichel/qgis-project-id8353.zip;"[{""name"": ""Cloud_free_composite"", ""inference_id"": 8353, ""value_type"": ""numerical"", ""value_range"": [383.0, 7426.5], ""dims"": [""band"", ""y"", ""x""], ""file_type"": ""geotiff"", ""vis_type"": ""composite"", ""data"": ""/output/sen2cube/steffen.reichel/Cloud_free_composite_id8353_4326.tiff"", ""bytes"": 9156158, ""band_value_ranges"": [[383.0, 7426.5], [621.0, 6010.0], [865.5, 5697.0]]}]";SUCCEEDED;The inference was successfully processed;;;2020-08-01T23:59:59.999000+00:00;2020-03-01T00:00:00+00:00;2021-07-25T21:11:41.393191+00:00;2021-07-25T21:21:07.064940+00:00;2021-07-25T21:16:45.956145+00:00

Restart finished / failed inferences. This will not reschedule running inferences! Abort them first.

$ sen2cli inference rerun --id=8343
id;factbase_id;favourite;knowledgebase_id;owner;qgis_project_location;output;status;status_message;status_progress;status_timestamp;temp_range_end;temp_range_start;timestamp_created;timestamp_finished;timestamp_started
8343;1;False;218;steffen.reichel;/output/sen2cube/steffen.reichel/qgis-project-id8343.zip;"[{""name"": ""Cloud_free_composite"", ""inference_id"": 8343, ""value_type"": ""numerical"", ""value_range"": [330.0, 2611.0], ""dims"": [""band"", ""y"", ""x""], ""file_type"": ""geotiff"", ""vis_type"": ""composite"", ""data"": ""/output/sen2cube/steffen.reichel/Cloud_free_composite_id8343_4326.tiff"", ""bytes"": 2037934, ""band_value_ranges"": [[330.0, 2296.0], [547.0, 2240.0], [768.0, 2611.0]]}]";CREATED;The inference was successfully processed;;;2020-08-01T23:59:59.999000+00:00;2020-03-01T00:00:00+00:00;2021-07-25T20:46:20.449208+00:00;2021-07-25T20:47:22.156676+00:00;2021-07-25T20:46:19.984137+00:00

Abort running / scheduled inferences.

$ sen2cli inference abort --id=8342
id;factbase_id;favourite;knowledgebase_id;owner;qgis_project_location;output;status;status_message;status_progress;status_timestamp;temp_range_end;temp_range_start;timestamp_created;timestamp_finished;timestamp_started
8342;1;False;218;steffen.reichel;/output/sen2cube/steffen.reichel/qgis-project-id8342.zip;"[{""name"": ""Cloud_free_composite"", ""inference_id"": 8342, ""value_type"": ""numerical"", ""value_range"": [382.0, 3122.0], ""dims"": [""band"", ""y"", ""x""], ""file_type"": ""geotiff"", ""vis_type"": ""composite"", ""data"": ""/output/sen2cube/steffen.reichel/Cloud_free_composite_id8342_4326.tiff"", ""bytes"": 689508, ""band_value_ranges"": [[382.0, 3122.0], [647.5, 2730.0], [865.5, 2621.0]]}]";ABORTED;The inference was accepted by the inference engine;;;2020-08-01T23:59:59.999000+00:00;2020-03-01T00:00:00+00:00;2021-07-25T20:46:11.031368+00:00;2021-07-25T21:00:36.828885+00:00;2021-07-25T21:00:55.640893+00:00

Delete inferences

$ sen2cli inference delete --id=8341
id;factbase_id;favourite;knowledgebase_id;owner;qgis_project_location;output;status;status_message;status_progress;status_timestamp;temp_range_end;temp_range_start;timestamp_created;timestamp_finished;timestamp_started
8341;1;False;218;steffen.reichel;/output/sen2cube/steffen.reichel/qgis-project-id8341.zip;"[{""name"": ""Cloud_free_composite"", ""inference_id"": 8341, ""value_type"": ""numerical"", ""value_range"": [356.0, 5215.5], ""dims"": [""band"", ""y"", ""x""], ""file_type"": ""geotiff"", ""vis_type"": ""composite"", ""data"": ""/output/sen2cube/steffen.reichel/Cloud_free_composite_id8341_4326.tiff"", ""bytes"": 5400877, ""band_value_ranges"": [[356.0, 5215.5], [572.5, 3839.0], [802.0, 4391.0]]}]";ABORTED;The inference was aborted.;;;2020-08-01T23:59:59.999000+00:00;2020-03-01T00:00:00+00:00;2021-07-25T20:42:55.796924+00:00;2021-07-25T21:02:11.942261+00:00;2021-07-25T21:00:55.105278+00:00

All filters can also be applied to rerun, abort, and delete.

$ sen2cli inference rerun --knowledgebase_id=218
id;factbase_id;favourite;knowledgebase_id;owner;qgis_project_location;output;status;status_message;status_progress;status_timestamp;temp_range_end;temp_range_start;timestamp_created;timestamp_finished;timestamp_started
8341;1;False;218;steffen.reichel;/output/sen2cube/steffen.reichel/qgis-project-id8341.zip;"[{""name"": ""Cloud_free_composite"", ""inference_id"": 8341, ""value_type"": ""numerical"", ""value_range"": [356.0, 5215.5], ""dims"": [""band"", ""y"", ""x""], ""file_type"": ""geotiff"", ""vis_type"": ""composite"", ""data"": ""/output/sen2cube/steffen.reichel/Cloud_free_composite_id8341_4326.tiff"", ""bytes"": 5400877, ""band_value_ranges"": [[356.0, 5215.5], [572.5, 3839.0], [802.0, 4391.0]]}]";CREATED;The inference was successfully processed;;;2020-08-01T23:59:59.999000+00:00;2020-03-01T00:00:00+00:00;2021-07-25T20:42:55.796924+00:00;2021-07-25T20:46:02.843996+00:00;2021-07-25T20:42:54.826214+00:00
8342;1;False;218;steffen.reichel;/output/sen2cube/steffen.reichel/qgis-project-id8342.zip;"[{""name"": ""Cloud_free_composite"", ""inference_id"": 8342, ""value_type"": ""numerical"", ""value_range"": [382.0, 3122.0], ""dims"": [""band"", ""y"", ""x""], ""file_type"": ""geotiff"", ""vis_type"": ""composite"", ""data"": ""/output/sen2cube/steffen.reichel/Cloud_free_composite_id8342_4326.tiff"", ""bytes"": 689508, ""band_value_ranges"": [[382.0, 3122.0], [647.5, 2730.0], [865.5, 2621.0]]}]";CREATED;The inference was successfully processed;;;2020-08-01T23:59:59.999000+00:00;2020-03-01T00:00:00+00:00;2021-07-25T20:46:11.031368+00:00;2021-07-25T20:47:45.398702+00:00;2021-07-25T20:46:10.288988+00:00
8343;1;False;218;steffen.reichel;/output/sen2cube/steffen.reichel/qgis-project-id8343.zip;"[{""name"": ""Cloud_free_composite"", ""inference_id"": 8343, ""value_type"": ""numerical"", ""value_range"": [330.0, 2611.0], ""dims"": [""band"", ""y"", ""x""], ""file_type"": ""geotiff"", ""vis_type"": ""composite"", ""data"": ""/output/sen2cube/steffen.reichel/Cloud_free_composite_id8343_4326.tiff"", ""bytes"": 2047434, ""band_value_ranges"": [[330.0, 2296.0], [547.0, 2240.0], [768.0, 2611.0]]}]";CREATED;The inference was successfully processed;;;2020-08-01T23:59:59.999000+00:00;2020-03-01T00:00:00+00:00;2021-07-25T20:46:20.449208+00:00;2021-07-25T20:58:38.723913+00:00;2021-07-25T20:57:39.019024+00:00

To preview what inferences would be affected by rerun, abort, and delete you can use the option --dry-run.

$ sen2cli inference delete --status=FAILED --dry-run
id;factbase_id;favourite;knowledgebase_id;owner;qgis_project_location;output;status;status_message;status_progress;status_timestamp;temp_range_end;temp_range_start;timestamp_created;timestamp_finished;timestamp_started
8346;1;False;218;steffen.reichel;;[];FAILED;"The inference failed: Evaluation failed at 'data' because of ""OperationalError('(psycopg2.OperationalError) FATAL:  remaining connection slots are reserved for non-replication superuser connections\\n')""";;;2020-08-01T23:59:59.999000+00:00;2020-03-01T00:00:00+00:00;2021-07-25T21:11:25.077964+00:00;2021-07-25T21:16:40.303429+00:00;2021-07-25T21:15:28.514281+00:00
8354;1;False;218;steffen.reichel;;[];FAILED;"The inference failed: Evaluation failed at 'data' because of ""OperationalError('(psycopg2.OperationalError) FATAL:  remaining connection slots are reserved for non-replication superuser connections\\n')""";;;2020-08-01T23:59:59.999000+00:00;2020-03-01T00:00:00+00:00;2021-07-25T21:11:42.475198+00:00;2021-07-25T21:16:54.250457+00:00;2021-07-25T21:15:31.810449+00:00
8357;1;False;218;steffen.reichel;;[];FAILED;"The inference failed: Evaluation failed at 'data' because of ""OperationalError('(psycopg2.OperationalError) FATAL:  remaining connection slots are reserved for non-replication superuser connections\\n')""";;;2020-08-01T23:59:59.999000+00:00;2020-03-01T00:00:00+00:00;2021-07-25T21:11:47.710966+00:00;2021-07-25T21:17:00.174409+00:00;2021-07-25T21:16:58.742892+00:00
8358;1;False;218;steffen.reichel;;[];FAILED;"The inference failed: Evaluation failed at 'mask' because of ""ValueError('zero-size array to reduction operation fmin which has no identity')""";;;2020-08-01T23:59:59.999000+00:00;2020-03-01T00:00:00+00:00;2021-07-25T21:11:49.843503+00:00;2021-07-25T21:17:42.217461+00:00;2021-07-25T21:15:30.031904+00:00
8355;1;False;218;steffen.reichel;;[];FAILED;"The inference failed: Evaluation failed at 'data' because of ""OperationalError('(psycopg2.OperationalError) FATAL:  remaining connection slots are reserved for non-replication superuser connections\\n')""";;;2020-08-01T23:59:59.999000+00:00;2020-03-01T00:00:00+00:00;2021-07-25T21:11:44.445165+00:00;2021-07-25T21:17:02.535571+00:00;2021-07-25T21:15:32.080859+00:00
8361;1;False;218;steffen.reichel;;[];FAILED;"The inference failed: Evaluation failed at 'data' because of ""OperationalError('(psycopg2.OperationalError) FATAL:  remaining connection slots are reserved for non-replication superuser connections\\n')""";;;2020-08-01T23:59:59.999000+00:00;2020-03-01T00:00:00+00:00;2021-07-25T21:11:54.850137+00:00;2021-07-25T21:17:13.503607+00:00;2021-07-25T21:15:33.750006+00:00
8367;1;False;218;steffen.reichel;;[];FAILED;"The inference failed: Evaluation failed at 'data' because of ""OperationalError('(psycopg2.OperationalError) FATAL:  remaining connection slots are reserved for non-replication superuser connections\\n')""";;;2020-08-01T23:59:59.999000+00:00;2020-03-01T00:00:00+00:00;2021-07-25T21:12:05.651447+00:00;2021-07-25T21:16:40.411747+00:00;2021-07-25T21:15:36.545195+00:00
8349;1;False;218;steffen.reichel;;[];FAILED;"The inference failed: Evaluation failed at 'data' because of ""OperationalError('(psycopg2.OperationalError) FATAL:  remaining connection slots are reserved for non-replication superuser connections\\n')""";;;2020-08-01T23:59:59.999000+00:00;2020-03-01T00:00:00+00:00;2021-07-25T21:11:31.692110+00:00;2021-07-25T21:17:13.516873+00:00;2021-07-25T21:16:44.912674+00:00
8366;1;False;218;steffen.reichel;;[];FAILED;"The inference failed: Evaluation failed at 'data' because of ""OperationalError('(psycopg2.OperationalError) FATAL:  remaining connection slots are reserved for non-replication superuser connections\\n')""";;;2020-08-01T23:59:59.999000+00:00;2020-03-01T00:00:00+00:00;2021-07-25T21:12:04.080897+00:00;2021-07-25T21:17:06.487459+00:00;2021-07-25T21:17:04.758312+00:00

🎓 Advanced usage

For further processing output can be redirected.

$ sen2cli inference ls > inferences.csv

If the default CSV is not desireable there are more output formats:

csv_no_hdr - same as csv but without header line
json - JSON array

$ sen2cli inference --output_format=json ls > inferences.json

Create inference for specific files in a folder (on Unix):

find ./host_data/geodata -name "id_9*01.geojson" -exec sen2cli inference create 218 1 2020-03-01 2020-08-01 {} --description="{}" \;

###Advanced filtering For more advanced filters ls has a --raw_modifier option. The content of this option will be added as URL parameter to the query. For example if you want to filter for specific error messages, you can create a file filter.json with the following contents

[
  {
    "name": "status_message",
    "op": "ilike",
    "val": "%psycopg2.OperationalError%"
  }
]

$ sen2cli inference ls --raw_modifier="filter=$(cat ./filter.json)"
id;factbase_id;favourite;knowledgebase_id;owner;qgis_project_location;output;status;status_message;status_progress;status_timestamp;temp_range_end;temp_range_start;timestamp_created;timestamp_finished;timestamp_started
8367;1;False;218;steffen.reichel;;[];FAILED;"The inference failed: Evaluation failed at 'data' because of ""OperationalError('(psycopg2.OperationalError) FATAL:  remaining connection slots are reserved for non-replication superuser connections\\n')""";;;2020-08-01T23:59:59.999000+00:00;2020-03-01T00:00:00+00:00;2021-07-25T21:12:05.651447+00:00;2021-07-25T21:16:40.411747+00:00;2021-07-25T21:15:36.545195+00:00
8366;1;False;218;steffen.reichel;;[];FAILED;"The inference failed: Evaluation failed at 'data' because of ""OperationalError('(psycopg2.OperationalError) FATAL:  remaining connection slots are reserved for non-replication superuser connections\\n')""";;;2020-08-01T23:59:59.999000+00:00;2020-03-01T00:00:00+00:00;2021-07-25T21:12:04.080897+00:00;2021-07-25T21:17:06.487459+00:00;2021-07-25T21:17:04.758312+00:00
8361;1;False;218;steffen.reichel;;[];FAILED;"The inference failed: Evaluation failed at 'data' because of ""OperationalError('(psycopg2.OperationalError) FATAL:  remaining connection slots are reserved for non-replication superuser connections\\n')""";;;2020-08-01T23:59:59.999000+00:00;2020-03-01T00:00:00+00:00;2021-07-25T21:11:54.850137+00:00;2021-07-25T21:17:13.503607+00:00;2021-07-25T21:15:33.750006+00:00
8357;1;False;218;steffen.reichel;;[];FAILED;"The inference failed: Evaluation failed at 'data' because of ""OperationalError('(psycopg2.OperationalError) FATAL:  remaining connection slots are reserved for non-replication superuser connections\\n')""";;;2020-08-01T23:59:59.999000+00:00;2020-03-01T00:00:00+00:00;2021-07-25T21:11:47.710966+00:00;2021-07-25T21:17:00.174409+00:00;2021-07-25T21:16:58.742892+00:00
8355;1;False;218;steffen.reichel;;[];FAILED;"The inference failed: Evaluation failed at 'data' because of ""OperationalError('(psycopg2.OperationalError) FATAL:  remaining connection slots are reserved for non-replication superuser connections\\n')""";;;2020-08-01T23:59:59.999000+00:00;2020-03-01T00:00:00+00:00;2021-07-25T21:11:44.445165+00:00;2021-07-25T21:17:02.535571+00:00;2021-07-25T21:15:32.080859+00:00
8354;1;False;218;steffen.reichel;;[];FAILED;"The inference failed: Evaluation failed at 'data' because of ""OperationalError('(psycopg2.OperationalError) FATAL:  remaining connection slots are reserved for non-replication superuser connections\\n')""";;;2020-08-01T23:59:59.999000+00:00;2020-03-01T00:00:00+00:00;2021-07-25T21:11:42.475198+00:00;2021-07-25T21:16:54.250457+00:00;2021-07-25T21:15:31.810449+00:00
8349;1;False;218;steffen.reichel;;[];FAILED;"The inference failed: Evaluation failed at 'data' because of ""OperationalError('(psycopg2.OperationalError) FATAL:  remaining connection slots are reserved for non-replication superuser connections\\n')""";;;2020-08-01T23:59:59.999000+00:00;2020-03-01T00:00:00+00:00;2021-07-25T21:11:31.692110+00:00;2021-07-25T21:17:13.516873+00:00;2021-07-25T21:16:44.912674+00:00
8346;1;False;218;steffen.reichel;;[];FAILED;"The inference failed: Evaluation failed at 'data' because of ""OperationalError('(psycopg2.OperationalError) FATAL:  remaining connection slots are reserved for non-replication superuser connections\\n')""";;;2020-08-01T23:59:59.999000+00:00;2020-03-01T00:00:00+00:00;2021-07-25T21:11:25.077964+00:00;2021-07-25T21:16:40.303429+00:00;2021-07-25T21:15:28.514281+00:00

For full documentation on the filter language see flask-rest-jsonapi filterring.

NOTE this might have unforseen consquences and side-effects when using in combination with other filters. As this parameter is just added as a URL parameter, it can be used for other shenanigans like pagination, or sparse result sets. For that reason it's only available in ls and not the rest. USE AT YOUR OWN RISK! ;-)

License

This program is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.

This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.

You should have received a copy of the GNU General Public License along with this program. If not, see https://www.gnu.org/licenses/.

Name		Name	Last commit message	Last commit date
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.github		.github
.idea		.idea
sen2cli		sen2cli
.editorconfig		.editorconfig
.gitignore		.gitignore
.pylintrc		.pylintrc
CHANGELOG.md		CHANGELOG.md
CONTRIBUTE.md		CONTRIBUTE.md
Dockerfile		Dockerfile
LICENSE		LICENSE
MANIFEST.in		MANIFEST.in
README.md		README.md
sen2cli.py		sen2cli.py
setup.py		setup.py

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Sen2Cube.at - Commandline interface

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Run dev version in docker

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Sen2Cube.at - Commandline interface

🔧 Installation

🐍 Local Python environment

🐳 Docker

Run dev version in docker

🔰 Basic Usage

Start session / login

Working with inferences

🎓 Advanced usage

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