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Utilities for pre-processing emission-excitation-matrix (EEM).

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The eemR package implements various functions used calculate metrics from excitation-emission matrix (EEM) as well as to preform pre-processing corrections before PARAFAC analysis.

The lastest release of the package from CRAN can be installed with:

install.packages("eemR")

The lastest development version of the package can be installed with:

devtools::install_github("PMassicotte/eemR")

Vignette

A detailed vignette presenting the package which can be viewed using:

vignette(topic = "introduction", package = "eemR")

Supported spectrophotometers

At the moment, the following EEM types are supported:

  • Cary Eclipse .csv files

  • Aqualog .dat files

  • Shimadzu .TXT files

EEM can be read using the eem_read() function. Please fill an issue if you have other file formats you would like to add to the package.

At the moment I need files from:

  • FluoromaxIII

  • Perkin elmer

  • Hitachi

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