enzymeBayes

Final project repository for Jiayu Zhang and Kiran Gauthier for Machine Learning with Probabilistic Programming.

Final Project Notebook

The final project notebook can be found under /final-project/final-notebook.ipynb. All model specifications can be found in the /final-project/helper_file.ipynb notebook and all helper functions for plotting and analyzing data can be found in the /final-project/enzyme_utils_hpw.py file.

Development

Once you activate the virtual environment to run this project, you can use pip to install the necessary packages.

(venv)$ pip install -r requirements.txt

You should see a message at the end that resembles something like

Successfully installed appnope-0.1.0 ...