GitHub - maarten-devries/MIT-6.874-Project: This is the repository for our term project for MIT 6.874 - Computational Systems Biology: Deep Learning in the Life Sciences.

maarten-devries / MIT-6.874-Project Public

This is the repository for our term project for MIT 6.874 - Computational Systems Biology: Deep Learning in the Life Sciences.

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Name		Name	Last commit message	Last commit date
Latest commit History 23 Commits
Annotated.ipynb		Annotated.ipynb
CVAE_MARS.ipynb		CVAE_MARS.ipynb
Latent_space_comp.ipynb		Latent_space_comp.ipynb
MARS_Maarten.ipynb		MARS_Maarten.ipynb
MARS_MultiCVAE.ipynb		MARS_MultiCVAE.ipynb
MARS_latent_comp.ipynb		MARS_latent_comp.ipynb
MARS_latent_comp_0429.ipynb		MARS_latent_comp_0429.ipynb
MARS_latent_metadata-maarten.ipynb		MARS_latent_metadata-maarten.ipynb
MARS_latent_metadata.ipynb		MARS_latent_metadata.ipynb
MARS_maartendata_EY.ipynb		MARS_maartendata_EY.ipynb
MARS_source.ipynb		MARS_source.ipynb
VAE_MARS.ipynb		VAE_MARS.ipynb
colon_anno.csv		colon_anno.csv
colon_broad_anno.csv		colon_broad_anno.csv
dorothea_melanoma_scRNA.ipynb		dorothea_melanoma_scRNA.ipynb
pySCENIC_melanoma_scRNA.ipynb		pySCENIC_melanoma_scRNA.ipynb
scRNA_train_script.ipynb		scRNA_train_script.ipynb
scRNA_update_code.ipynb		scRNA_update_code.ipynb
scTrans.py		scTrans.py
seurat_convert.R		seurat_convert.R
seurat_level2_anno.csv		seurat_level2_anno.csv