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mahmoudibrahim edited this page Sep 30, 2015 · 2 revisions

JAMM Installation (since v1.0.6rev1)

Step 1. Download JAMM's Latest Release

Step 2. Make sure you are on a Linux system

Step 3. Make sure you have R (version 3 or later), awk and Perl installed

Step 4. Install the following R packages: signal - mclust (versions 4 or 5)

You are good to go. You just need to unzip the JAMM folder you donwloaded and you can run JAMM via:

bash /path/to/JAMM/folder/JAMM.sh

For more information on how to use JAMM, please check this page.

JAMM Installation (from v1.0.4 up to v1.0.6)

To install those older JAMM versions you will aslo need the sqldf R package in addition to the packages listed above.

We tested those versions with the following combination of R packages, so those should work:

  • R version 3.1.0: sqldf_0.4-10 RSQLite_1.0.0 DBI_0.3.1 gsubfn_0.6-6 proto_0.3-10 chron_2.3-45 tcltk_3.1.0
  • R version 3.0.1: sqldf_0.4-7.1 RSQLite_0.11.4 DBI_0.3.1 gsubfn_0.6-6 proto_0.3-10 chron_2.3-45 tcltk_3.0.1