Feature/enable tags #389
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Nextflow Test | |
| on: | |
| push: | |
| pull_request: | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Set up Go 1.x | |
| uses: actions/setup-go@v5 | |
| with: | |
| go-version: 1.21 | |
| - name: Check out code | |
| uses: actions/checkout@v2 | |
| - name: Build Funnel (if cache does not exist) | |
| run: make build | |
| - name: Store Funnel | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: funnelBin | |
| path: funnel | |
| nextflow: | |
| needs: build | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Download Funnel | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: funnel | |
| - name: Start Funnel | |
| run: | | |
| chmod +x ./funnel | |
| ./funnel server --LocalStorage.AllowedDirs $HOME run & | |
| - name: Install Nextflow | |
| run: | | |
| git clone https://github.com/nextflow-io/nextflow | |
| cd nextflow | |
| make compile | |
| - name: Install nf-canary and GA4GH-TES plugin | |
| run: | | |
| git clone https://github.com/seqeralabs/nf-canary | |
| cd nf-canary | |
| cat <<EOF >> nextflow.config | |
| plugins { | |
| id 'nf-ga4gh' | |
| } | |
| process.executor = 'tes' | |
| tes.endpoint = 'http://localhost:8000' | |
| EOF | |
| - name: Run nf-canary tests | |
| run: | | |
| ./nextflow/nextflow run nf-canary/main.nf |