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v1.0.0

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@METS0JA METS0JA released this 24 Aug 12:12
· 102 commits to main since this release
  • major updates in the front-end (GUI); individual tools on the right, pipelines on left.
  • added debugging mode and improved log info
  • added NextITS pipeline for PacBio ITS sequences (not available for MacOS release)
  • added ORFfinder + HMM bsed pseudogene/off-targets filtering for protein coding genes
  • added RDP classifier
  • added DADA2 pipeline for PacBio data
  • added DADA2 pipeline for paired-end mixed oriented amplicons (fwd_orient and rev_orient are denoised separately and then merged)
  • all features will get sha1 ID
  • added ASVs to OTUs module (cluster ASVs into OTUs with vsearch)
  • added tag-jumps filtering module (UNCROSS2)