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Examples and Scripts mostly for HPC

  1. array

    • Slurm array jobs
    • Bag of task parallelism in python
  2. assignments

    • Some assignments for CS 580 at CSM
  3. batch

    • Advanced batch scripting in slurm and pbs
  4. cache

    • Shows the effects of cache blocking on a matrix multiply like operation.
  5. chain

    • Scripts for chaining jobs in slrum with dependency
  6. coarray

    • Coarray Fortran
  7. color

    • Node coloring - setting up node specific communicators in MPI
  8. darwin19

    • Parallel Genetic Alogorithm
  9. eigen

    • eigenvalue problems - utilities for converting sparse maticies
  10. fft

    • Various fft examples including windowing
  11. friday

    • Examples for a one day parallel programming tutorial. Includes node specific write examples
  12. gpu_parallel

    • hybrid GPU openmp mpi programs
  13. hello_bgq

    • Simple examples for BGQ
  14. hybrid

    • Stommel code and other in hybrid MPI/OpenMP for teaching
  15. inverts

    • Matrix inversion examples in several languages and libs - C,F90,R,Python
  16. matlab

    • Matlab examples including slurm array jobs
  17. more_gpu

    • cuda, C and Fortran
  18. morestuff

    • Redirection from C, ping pong, node communicators
  19. mpi

    • Basick MPI examples, C, Fortran, Python, not R (see below), alltoall and hypercube.
  20. oneday

    • Examples for 1 day HPC class. Includes scripts, tricks, libs (fft and linear)
  21. openmp

    • Lots of OpenMP examples
  22. phi

    • Intel phi examples, including offload, directive, hybrid
  23. power_gpu

    • GPU examples, directive, cuda, fft, hello world
  24. quick

    • Examples for a quick start guid to parallel programming MPI and hybrid
  25. r

    • R examples, parallel for, Stommel, MPI, spawn, install script for parallel stuff
  26. scalapack

    • Scalapack examples, includes RCS code
  27. scripts

    • A bit more complicated slurm scripts, local disk, records, notifications...
  28. slurm

    • Basic to advance slurm scripts including array jobs
  29. snoopy

    • Fortran IV calendar program
  30. start

    • A quick start guide with instructions, MPI, OpenMP, R, Python, slurm, hybrid
  31. stommel

    • Stommel parallel finite difference code, Fortran, C, Python
  32. tif

    • Create large tiff files in parallel
  33. tims_tools

    • Many useful small scripts, including plotting, tymer, source for X test
  34. tree

    • Source for tree list program
  35. utilities

    • Old utilities not real useful today.
  36. workshop

    • Examples for HPC workshop
  37. parallel.f90 and parallel.py

    • Shows how to communicate via a file, used to show message passing concept
  38. simple

    • Basic slurm script