Protein structure comparison tools such as SSAP and SNAP
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Updated
Nov 10, 2023 - C++
Protein structure comparison tools such as SSAP and SNAP
Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm
lib310 python package
BioC++ core library (alphabet, meta, ranges)
DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.
Prospr is a universal toolbox for protein structure prediction within the HP-model. The Python package is based on a C++ core, which gives Prospr its high performance. The C++ core is made available as a separate zip file to facilitate high-performance computing applications. The package comes with many prediction algorithms and datasets to use.
PCA and normal mode analysis of proteins
Canonical (Kohn-Sham) molecular orbital calculation software for large molecules such as protein
A simple yet powerful sequence clustering tool.
pmUE (Protein Modelling Unreal Engine) - a repo for constructing a molecule visualizer plugin in Unreal
MODE-TASK plugin for PyMOL
Translate nucleotides (DNA & RNA) to aminoacid using IUPAC ambiguity codes
A bioinformatics tool, named Sequence Similarity 3D
Protein visualization using HTC Vive
A protein visualization system based on Unreal Engine 4.
Fragment based disorder simulation
Converts DNA to Protein along 1, 6 (fwd or reverse strand) or user defined frames
Bioinformatics Toolbox
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