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Releases: yamada-lab/functree-ng

v0.8.4

18 Mar 04:40
3c8afc0
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  • Fix layer mapping of custom tree upload.
  • Fix potential security vulnerabilities.
  • Update author info.

v0.8.3.0

08 May 21:08
818cc2d
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  • Update citation.
  • Upgrade dependencies.

v0.8.2.0

13 Mar 07:51
22f8faf
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  • Performance improvement
    • Loading of the viewer is reduced from 10 seconds to 2.5 seconds on average (4 fold speedup).
    • Visualization of the BRITE hierarchy at KO level does not crash the browser anymore (still not fast though).
  • Addition of mapping to a color gradient when submitting to iPath.
  • Addition of mapping values to circle area. The default is still to radius.
  • Simplification of tooltip text: removal of duplicated names and hierarchy information.
  • Fix of the search match highlight in Firefox.
  • UX improvement: the size of highlighted nodes on mouseover is reduced to avoid hiding neighboring nodes

0.8.1.0: Merge pull request #7 from yamada-lab/develop

11 Mar 04:11
a947198
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  1. Addition of a slider for ipath values cutoff and replacement of bower by yarn
  2. Handling of matrices that result in 0 mapped rows and matrices with duplicated entries
  3. Refactoring and redirection to a webpage for matrices with no mapping
  4. Addition of data range, and styling for the minimum abundance filter
  5. Minor fix and version update

v0.8.0.0

28 Feb 12:46
1a63967
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  • Improvement of iPath integration

    • Addition of control for color, width, opacity, and global map selection.
    • Default Functree 2 color palette is used for the first submission.
    • Streamlining of the controls layout and the UI.
    • Bug fix: selection of leaf nodes with value > 0 only.
  • Addition of bar plots to "Module undefined" nodes to highlight the amount of pathway KO not assigned to a module

v0.7.6.3

25 Feb 09:24
bde9d29
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Addition of an annotation section to the TSV reference tree format

v0.7.6.2

15 Feb 07:47
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  1. Addition of a toggle action to show/hide node labels
  2. Improvement of the database selection description

v0.7.6.1

18 Jan 09:38
4f5ba99
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Addition of a help section on the functree explorer page