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indigo-1.24.0

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@AliaksandrDziarkach AliaksandrDziarkach released this 04 Oct 16:27
· 42 commits to master since this release
000e8aa

What's Changed

Features

  • #2096 - Support retrosynthetic arrows - PNG/SVG rendering
  • #2097 - Add retrosynthetic arrow import/export for cdx/cdxml formats
  • #2031 - Build a data structure for a reaction tree
  • #1619 - Import/export of variant monomers from IDT
  • #2052 - Position pathway reaction on canvas
  • #2015 - Import/Export of variant monomers from Fasta/Sequence
  • #2028 - PNG image support in CDX/CDXML
  • #2128 - Add Multi-tail Arrows to Pathway Reactions Loaded from RDF
  • #2188 - HELM 2 support: variant monomers
  • #2189 - HELM 2 support: support for SMILES

Bugfixes and improvements

  • #2232 - System replace arrows of diffrent types with Open Arrow type while loading from PPTX(CDX)
  • #2249 - Arrow Open Angle changes to Arrow Filled Triangle after saving and opening in CDX/CDXML
  • #2120 - Export the structure for nucleotides 2-Amino-dA does not work correctly
  • #2266 - Error message is wrong for missing ratio number (PEPTIDE1{(A:+C:0.1)}$$$$V2.0)
  • #2300 - HELM loading doesn't work in remote version
  • #2293 - Export IDT doesn't work for natural ambiguous monomers
  • #2336 - Ribose sugar doesn't allow to load IDT custom mixed bases
  • #2358 - Import of monomer with only one connection point (R2) doesn't work
  • #2321 - Export of multi-character monomer IDs inside ambiguous monomer works wrong
  • #2375 - Export to IDT doesn't work at all for mixed bases
  • #2356 - Library ambiguous peptides loaded as mixtures from FASTA
  • #2357 - Export to HELM doesn't work if we connect peptide TO molecule
  • #2303 - Import of variant monomers from Sequence doesn't work for RNA and FASTA for RNA/DNA
  • #2355 - Import of HELM with fractional ratio mixture values doesn't work - system expects integer
  • #2421 - Incorrect stereo-label placement for (E) and (Z) (indigo part)
  • #2417 - The layout is incorrect with retrosynthetic arrow

Full Changelog: indigo-1.23.0...indigo-1.24.0